Gene Information

Name : D648_90 (D648_90)
Accession : YP_007667522.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Virulence
Product : Capsule polysaccharide export inner-membrane protein BexB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 12006 - 12764 bp
Length : 759 bp
Strand : +
Note : ABC-type polysaccharide/polyol phosphate export systems, permease component COG1682; Capsule polysaccharide export inner-membrane protein BexB of Proteobacteria UniRef RepID=BEXB2_HAEIF

DNA sequence : 
GTGATTCAAAAACGGGTGATTCACGCCCTTTTAATGAGGGAATTAATTACTCGTTATGGGCGTAAAAATATTGGCTTCTT
ATGGCTTTTTATCGAACCATTATTGTTAACGTTAGTGATTACTGTTGCTTGGAAATATATAAAAGCAGATAAGTTTTCAA
CTTTAAATATTATCGCTTTTATGATTACAGGCTACCCTATCGCAATGATGTGGAGAAATGCCTCTAATAGAGCTCAAGGA
GCAATATCAGCAAACTTAAGTTTGCTTTACCACAGAAATGTGGGAGTGCTAGATACGATATTTACTCGAGTTTTATTAGA
AGTTACTGGCGCATCTATCGCCCAAATTCTCTTAATGACTATATTTATCGCTATTGGTTGGATAGAAATACCTAACGATA
TTTTCTATATGCTCTGTGCTTGGATATTAATGGCATTTTTTGCCTTAGGTTTAGGTTTAATTATCTGTACTTTAGCACAT
TATATTGAACCTTTTGGTAAGATTTGGGGAACATTCAGCTTCTTTCTACTTCCTCTTTCTGGTGCATTCTTCTTTGTCCA
TAATTTACCGCTAACTGCTCAAAATATTGCCTTATGGTTTCCAATGATTCATGGTACAGAAATGTTTAGACATGGTTATT
TTGGTGAAACGGTAATTACCTATGAGAGCATTAGTTATCTTATAGTAAGTGATATTATTCTTCTATTTATAGGACTGCTT
TGTGTGAGAAGTTTTAGTAAAGGGATAGAACCAAGATGA

Protein sequence : 
MIQKRVIHALLMRELITRYGRKNIGFLWLFIEPLLLTLVITVAWKYIKADKFSTLNIIAFMITGYPIAMMWRNASNRAQG
AISANLSLLYHRNVGVLDTIFTRVLLEVTGASIAQILLMTIFIAIGWIEIPNDIFYMLCAWILMAFFALGLGLIICTLAH
YIEPFGKIWGTFSFFLLPLSGAFFFVHNLPLTAQNIALWFPMIHGTEMFRHGYFGETVITYESISYLIVSDIILLFIGLL
CVRSFSKGIEPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 1e-81 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D648_90 YP_007667522.1 Capsule polysaccharide export inner-membrane protein BexB VFG0685 Protein 2e-87 75
D648_90 YP_007667522.1 Capsule polysaccharide export inner-membrane protein BexB VFG0697 Protein 2e-87 75
D648_90 YP_007667522.1 Capsule polysaccharide export inner-membrane protein BexB VFG0257 Protein 5e-82 67
D648_90 YP_007667522.1 Capsule polysaccharide export inner-membrane protein BexB VFG2564 Protein 4e-50 44