Gene Information

Name : D648_5430 (D648_5430)
Accession : YP_007668055.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Virulence
Product : iron transport system ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 548462 - 549205 bp
Length : 744 bp
Strand : -
Note : manganese/iron transporter ATP-binding protein PRK15056; Probable iron transport system ATP-binding protein HI_0361 of Bacteria UniRef RepID=Y361_HAEIN

DNA sequence : 
ATGACAACTGTTTCAGCCTCCATTTCCGTCGAAAATTTATCGGTCCGTTATAATAACGGACATATCGCTTTGCAAGATGT
CTCGTTTCATCTGGAAAACGGCACAATTTGTGCATTAATCGGCGTGAATGGAGGTGGAAAATCCACTCTGTTTAAAAGTT
TAATGGGGCTGGTTAAGCCATTAACCGGCTCTGTTAAGCTGAGTCAGCTCCCGATTGCTAAAGCCCTCAAACAAAATTTG
GTTTCCTATGTGCCACAAAGTGAAGAAGTGGACTGGCAATTTCCAGTTTCGGTTTACGATGTGGTAATGATGGGGCGATA
CGGCTATATGAATTTTCTACGCCGCCCAAGCCAAACCGATAAGCTCAAAGTAGAGCAAGCAATGCAACGCCTTGATGTTT
TACATCTCAAAGACAGGCAAATCGGCGAACTTTCCGGCGGGCAAAAAAAACGGGTATTTTTAGCCCGTGCCTTAGCTCAA
GAAAGTAAAATCATCTTACTTGATGAGCCTTTCACCGGTGTGGATGTTAAAACCGAAAATGCGATTGTTGAGCTACTTAA
ACAGCTTAAAAATGAGGGGCATTTGATTTTAGTTTCCACCCACAACCTTGCCAGCGTACCAAGCTTTTGCGATCAGGTTT
TGATGGTCAATCGCACGCTACTGGCAAAAGGTAAAACGGAAGAAATCTTTAATAATCAAAATTTAGAACGGGTGTTCGGC
GGTTTATTGCATTATCAAAAGTAG

Protein sequence : 
MTTVSASISVENLSVRYNNGHIALQDVSFHLENGTICALIGVNGGGKSTLFKSLMGLVKPLTGSVKLSQLPIAKALKQNL
VSYVPQSEEVDWQFPVSVYDVVMMGRYGYMNFLRRPSQTDKLKVEQAMQRLDVLHLKDRQIGELSGGQKKRVFLARALAQ
ESKIILLDEPFTGVDVKTENAIVELLKQLKNEGHLILVSTHNLASVPSFCDQVLMVNRTLLAKGKTEEIFNNQNLERVFG
GLLHYQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-70 59
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-70 59
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 2e-70 59
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-69 58
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-69 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D648_5430 YP_007668055.1 iron transport system ATP-binding protein BAC0440 Protein 1e-78 66
D648_5430 YP_007668055.1 iron transport system ATP-binding protein BAC0350 Protein 9e-71 59
D648_5430 YP_007668055.1 iron transport system ATP-binding protein BAC0400 Protein 1e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D648_5430 YP_007668055.1 iron transport system ATP-binding protein VFG0526 Protein 8e-71 59