Gene Information

Name : D648_2890 (D648_2890)
Accession : YP_007667802.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Unknown
Product : recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 276725 - 278650 bp
Length : 1926 bp
Strand : -
Note : Possible recombinase of Pasteurellaceae UniRef RepID=A7JS11_PASHA

DNA sequence :
ATGAGTAACTCTGGATTTACAGAAAAGCGCTATCATCACCGATTAGATCGGGGACGTATTATTTTGCAAAAAGGTAATAT
TTACCTAAATAGAGAAGATGGAGAACAGTATGAATTGGTTGATTATATGGATGAACCCTCCCAACTGCTCGTACGAAATC
TCAACACTCGTACAACCAAAGTCGTCAGTATTCATCAGCTTGAAAATTTCAAAATGAACGAGCGAACGGATCTTTCTGTG
GATGTAACCGCTATTAGTAATGAATATTGGGAGAAAGCCCAACAAAAATATGAGGCAATTAAACCGTTATTAGGGATGGA
TCAACATCGGCCTTACGCAGTTAAGGCTCGTGCAGAAGATGTTGGGGTGAACTCTCGTACATTATACCGTTGGTTACAAG
CCTATAATTCCATAGGATCTATCGCAGGTTTAGTCGATCAAAAACGTGGATGGCAACAAGGAAATTCCCGTTTAACGCCA
GAGCAAGACAAGCTGATCGTGCAGGTAATCAATGAGTTTTACCTACATAAACAACGCCCAACTACTGAGCAAACTATTAG
AGAAATTCGCCGCCGATGCAAAATTGAAAAAGTGGAAAGCCCAAGCAAAGAAACCATCCGTATGCGCATTTTGCATATTT
CAGAGGAAGAGCGATTACGGAAACGCGGGCAACGAGAAAAGGCACGCAACAAATTTAAGCCGAAGCCAAATAGCTTTCCT
GATGCGGATTATCCATTGAGTGTGGTACAAATTGACCATACACCAGTTGACCTAATTATTGTGGATAGTAAGTATCGTAA
ACCGATTGGCCGACCGTTTTTGACGGTTGCGATAGATATATACAGCAGAATGATTGTTGGTTATTACCTTTCACTTGATG
CGCCTTCTGTAACTTCGGTGGCGATGTGTATTGCACGTGGTATTTTGCCGAAAGAACGCCTACTGCTTGATTTAGGTTTG
CAAGGCTCAGAATGGAATGCTTTTGGCTACCCAGTGAAAGTGCATGTGGATAATGGCCCAGATTTTCAGGCTTTGGATTT
ATCTAAATCTTGTTCTGCACACGGAATCCATCTTGAATTTAGACCGATGGGGCGACCTGAATATGGCGGACATATTGAGC
GTGTTATCGGTACATTTATGAAAGAAGTTCACAGTTTAGCAGGAACAACATTCTCCAACATCAAAGAGCGTGACTCTTAC
GATTCGGAAAAAGAGGCCATTATGACTCTCGATGAGTTTGAAAAATGGTTGGTACATTACATTGTGAATGTTTACCACAA
ACGTGTGCATTCTGCTTTAGGCATTTCTCCTGAACAAAAATGGAAGATTGGTATTTTTGGAGATGAAAATGAAGTGGGAT
GTGGTTATCCGCAACTTCCTGTTGATGAACAAACACTACTACTTGATTTCTTGCCAAGTATCACTCGTACCATTCAGCAT
AATGGTGTAACAATTGACGGACTTCGTTATTACGATGTTGCGCTAAATATGTATATCAGTGATTCAGATGAAAGCGGTAA
ATCTAAGGAATTTCTGTTTCGCCGAGACCCGCGAAATATCAGCAAAATTTGGTTTTATGATCCGAAATTAAAACGTTACT
TCCCAATTCCATTTGCAAATCAGGCAATGCCCGAAATGAGCATTTGGGAATATAGAGAGGTTCGTAGCCGAATTGCGAAT
AAAGGTGATAAATATATCAACGAGCAACAAGTTTTAGACGGTTTAACCGAGATGCGTGAAATGGTTGCTGAATCGGCTCA
ACGGACGAAAAAAGCACGCCGTCAGGCTGAACGACAAAAAATGCACAAAGCAAGTAAGCCAATTATTGAAACAAAAGTGG
AAACTAAGGCTGTTGTACCAGTCGTAGTAACATCGAATTTGCTTGCTTTAGATGATGAGAGCTTATCTTTTGGTGAGGTG
GACTAA

Protein sequence :
MSNSGFTEKRYHHRLDRGRIILQKGNIYLNREDGEQYELVDYMDEPSQLLVRNLNTRTTKVVSIHQLENFKMNERTDLSV
DVTAISNEYWEKAQQKYEAIKPLLGMDQHRPYAVKARAEDVGVNSRTLYRWLQAYNSIGSIAGLVDQKRGWQQGNSRLTP
EQDKLIVQVINEFYLHKQRPTTEQTIREIRRRCKIEKVESPSKETIRMRILHISEEERLRKRGQREKARNKFKPKPNSFP
DADYPLSVVQIDHTPVDLIIVDSKYRKPIGRPFLTVAIDIYSRMIVGYYLSLDAPSVTSVAMCIARGILPKERLLLDLGL
QGSEWNAFGYPVKVHVDNGPDFQALDLSKSCSAHGIHLEFRPMGRPEYGGHIERVIGTFMKEVHSLAGTTFSNIKERDSY
DSEKEAIMTLDEFEKWLVHYIVNVYHKRVHSALGISPEQKWKIGIFGDENEVGCGYPQLPVDEQTLLLDFLPSITRTIQH
NGVTIDGLRYYDVALNMYISDSDESGKSKEFLFRRDPRNISKIWFYDPKLKRYFPIPFANQAMPEMSIWEYREVRSRIAN
KGDKYINEQQVLDGLTEMREMVAESAQRTKKARRQAERQKMHKASKPIIETKVETKAVVPVVVTSNLLALDDESLSFGEV
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tniA AFV47989.1 transposase TniA Not tested delta-AbaR25 Protein 1e-105 41
BJAB07104_00242 YP_008207707.1 Transposase-like protein Not tested AbaR25 Protein 1e-105 41
ABK1_0235 YP_005512807.1 transposase Not tested AbaR4d Protein 2e-105 41
BJAB0868_00249 YP_008211575.1 Transposase-like protein Not tested AbaR26 Protein 2e-105 41
BJAB0868_00274 YP_008211600.1 Transposase-like protein Not tested AbaR26 Protein 2e-105 41
ABZJ_00231 YP_005524187.1 transposition protein B Not tested AbaR22 Protein 2e-105 41
BJAB07104_00249 YP_008207714.1 Transposase-like protein Not tested AbaR25 Protein 5e-105 41
tniA AFH57198.1 putative transposase Not tested AbaR4a Protein 1e-105 41
ABTW07_0226 YP_005797113.1 transposition protein B Not tested AbaR4e Protein 2e-105 41
tniA AFV47944.1 transposase TniA Not tested AbaR25 Protein 1e-105 41
tniA AEO37449.1 TniA transposase Not tested AbaR4 Protein 2e-105 41
tniA AFV47961.1 transposase TniA Not tested AbaR25 Protein 1e-105 41
tniA AEQ20900.1 transposase Not tested Tn6166 Protein 2e-105 41
tniA AFV47975.1 transposase TniA Not tested delta-AbaR25 Protein 1e-105 41
tniA AEZ06028.1 transposase Not tested Tn6167 Protein 2e-105 41
tniAb AFV47958.1 transposase TniAb Not tested AbaR25 Protein 3e-105 41
tniAb AEZ06043.1 transposase Not tested Tn6167 Protein 1e-104 41
tniA CAJ77011.1 Transposase Not tested AbaR1 Protein 2e-105 41
BJAB07104_00270 YP_008207735.1 Transposase-like protein Not tested AbaR25 Protein 6e-105 41
tniA ADZ05760.1 transposase Not tested AbaR11 Protein 2e-105 41
ABK1_0251 YP_005512823.1 transposase Not tested AbaR4d Protein 4e-105 41
ABZJ_00250 YP_005524206.1 putative transposase Not tested AbaR22 Protein 4e-105 41
BJAB0868_00256 YP_008211582.1 Transposase-like protein Not tested AbaR26 Protein 4e-105 41
tniA AFC76426.1 TniA transposase Not tested AbaR5 Protein 3e-105 41