Gene Information

Name : D648_25230 (D648_25230)
Accession : YP_007670031.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase xerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2518491 - 2519384 bp
Length : 894 bp
Strand : -
Note : site-specific tyrosine recombinase XerD PRK00283; Tyrosine recombinase xerD of Gammaproteobacteria UniRef RepID=XERD_HAEIN

DNA sequence : 
ATGGCTGAGCTTGACCCTATTATTGAACAATTTCTCGATACACTATGGCAAGAACACGGTTTGTCTGAAAATACCGTTGC
CTCTTATCGTTCTGACTTAGAGCGTTTTTCCGATTATTTTTCTGAACCTAAAGCATTTCTGTCTCTCGATCATATCGACT
TACAAGGTTTTCTCGGCGAGCGTTTGGAGCAAGGCTATAAGGCGACAAGCTCTGCCAGAATGTTGAGTTGTTTAAGGAAA
TTTTTCCGTTTTTTATGCCTTGAGCATTATCGCCAAGATGACCCGACTTTAACCCTTTCTTCCCCTAAACGGGGTGCTTC
TTTACCCAAATCCTTAAGTGAAGATCAGGTAATGGATTTGCTAGATGCCCCGAATACGTTAGATCCGATAGAGTTACGGG
ATAAAGCAATGCTGGAGCTGCTGTATGCCACCGGTCTGCGGGTAACGGAGCTGGTGTCGCTTTCGATGGATAATATCAGC
CTCAAACAAGGGGTGGTGAGAATTATCGGTAAAGGGGATAAAGAGCGGTTAGTGCCATTGGGCGAGGAGGCGAATTATTG
GATACAGGAGTTTTTCCAGTACGGTCGCCCTATTTTGCTGAATAATCAGCAGTCTGATGTTGTATTTCCGAGCCGGCGAG
GTCAGCAGATGACAAGGCAGACGTTTTGGCATCGGATTAAGCACTATGCCGTGCTTGCAGGTATTGATGCAGATAAACTC
TCGCCTCACGTGCTTCGCCACGCCTTTGCGACCCATTTGGTCAATCATGGGGCTGATTTGCGAGTGGTACAGATGTTGCT
GGGGCATAGTGATTTATCGACCACCCAGATTTACACTCAAGTGGCAAAAGCCCGTTTGAAATCGCTTCATCAGCAATTTC
ACCCTAGAGGATAG

Protein sequence : 
MAELDPIIEQFLDTLWQEHGLSENTVASYRSDLERFSDYFSEPKAFLSLDHIDLQGFLGERLEQGYKATSSARMLSCLRK
FFRFLCLEHYRQDDPTLTLSSPKRGASLPKSLSEDQVMDLLDAPNTLDPIELRDKAMLELLYATGLRVTELVSLSMDNIS
LKQGVVRIIGKGDKERLVPLGEEANYWIQEFFQYGRPILLNNQQSDVVFPSRRGQQMTRQTFWHRIKHYAVLAGIDADKL
SPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTQVAKARLKSLHQQFHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-56 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-56 56