Gene Information

Name : D648_24250 (D648_24250)
Accession : YP_007669934.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2423067 - 2423564 bp
Length : 498 bp
Strand : -
Note : lipid hydroperoxide peroxidase PRK00522; Probable thiol peroxidase of Bacteria UniRef RepID=TPX_PASMU

DNA sequence : 
ATGAGTAAAGTGACTTTAGCAGGAAGCCCGATTGATGTTGCAGGCACATTTCCACAAAAAGGCGATGTGGTTGCCGATTT
TACCTTAGTCAACAGTGATTTAAGTGATGTTTCGCTTTCCGATTTTGATGGCAAACGCAAAGTGTTAAATATTTTCCCAA
GTATTGACACCGGCATTTGTGCCACTTCTGTGCGTGTGTTTAATCAAAAAGCGGCTGATGTAGCGAATACGGTTGTCCTT
TGTATTTCAGCGGATTTACCTTTTGCCCAAGCACGTTTCTGTGGAGCAGAAGGAATTGAAAATGCCAAAGTATTATCCAG
TTTCCGTCATCGTGATTTACACAACAAACTGGGGGTAGATATTATTTCAGGTCCGTTGGCAGGCTTAACTTCACGTTCAG
TAATTGTGTTAGATGAAAACAACAAGGTATTACACAGCGAATTAGTGCCGGAAATTAAACAAGAGCCGGATTATGAGGCG
GCGTTAGCGGTATTATAA

Protein sequence : 
MSKVTLAGSPIDVAGTFPQKGDVVADFTLVNSDLSDVSLSDFDGKRKVLNIFPSIDTGICATSVRVFNQKAADVANTVVL
CISADLPFAQARFCGAEGIENAKVLSSFRHRDLHNKLGVDIISGPLAGLTSRSVIVLDENNKVLHSELVPEIKQEPDYEA
ALAVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 8e-29 46
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 5e-29 46
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 6e-29 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 4e-29 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D648_24250 YP_007669934.1 thiol peroxidase VFG0087 Protein 2e-29 46