Gene Information

Name : D648_23320 (D648_23320)
Accession : YP_007669842.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Unknown
Product : Pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2326018 - 2326890 bp
Length : 873 bp
Strand : +
Note : pyridoxal biosynthesis lyase PdxS PRK04180; Pyridoxal biosynthesis lyase pdxS of Mycobacterium UniRef RepID=A1UF85_MYCSK

DNA sequence : 
ATGACTAATCGCTATGATTTAAACAGACAACTTGCTCAAATGTTAAAAGGCGGTGTAATTATGGATGTAACTACCCCTGA
GCAAGCCTGCATTGCGGAAGAAGCTGGAGCTTGTGCAGTAATGGCACTAGAGAGAATTCCTGCAGATATTCGTGCAGCTG
GTGGCGTTTCTCGTATGAGTGATCCCAAGATGATAAAGAGTATCCAAGCAGCGGTATCCATTCCTGTAATGGCGAAAGTA
CGTATTGGACACGTTACAGAAGCACAAATCCTGCAAGCGATCGAAATTGACTATATTGACGAAAGTGAGGTGCTTTCTCC
TGCAGATGATACCTTCCACATTAACAAGCGTAAATTTGAAGTGCCATTTGTATGTGGAGCAAAAAATTTAGGCGAAGCCC
TACGTCGTATTAATGAAGGCGCTGCTATGATCCGTAGTAAGGGCGAGCCAGGAACAGGCAATGTGGTGCAAGCAGTACAT
CATCTTCGCAAAATGAAACAAGAAATTGCCCGCTTGGTTTCACATACCACAGATGAACTTTATCACGTAGCTAAAGAGCT
CCAAGTACCATTTGATTTAGTACAATATGTACATCAGTACCAAAAATTGCCTGTTGTCACCTTTGCTGCTGGAGGTGTTG
CAACCCCTGCCGATGCTGCATTGATGATGCAGTTAGGTGCAGAAGGAGTCTTCGTTGGCTCAGGTATTTTCAAGTCAGGC
GATCCTGCTAAACGAGCGCGGGCCATTGTACAAGCTGTTACCAACTACAACGATCCTAAATTACTTGCGGAGCTTTCTGA
AGATTTAGGTGAAGCAATGGTAGGAATTAATGAGCAAGAGATTGAATTGCTAATGGCAGCAAGAGGTGTCTAA

Protein sequence : 
MTNRYDLNRQLAQMLKGGVIMDVTTPEQACIAEEAGACAVMALERIPADIRAAGGVSRMSDPKMIKSIQAAVSIPVMAKV
RIGHVTEAQILQAIEIDYIDESEVLSPADDTFHINKRKFEVPFVCGAKNLGEALRRINEGAAMIRSKGEPGTGNVVQAVH
HLRKMKQEIARLVSHTTDELYHVAKELQVPFDLVQYVHQYQKLPVVTFAAGGVATPADAALMMQLGAEGVFVGSGIFKSG
DPAKRARAIVQAVTNYNDPKLLAELSEDLGEAMVGINEQEIELLMAARGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-82 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-82 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-82 70