|
Name : D648_19770 (D648_19770) Accession : YP_007669488.1 Strain : Mannheimia haemolytica USDA-ARS-USMARC-185 Genome accession: NC_020834 Putative virulence/resistance : Unknown Product : ABC transporter, ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1989191 - 1990786 bp Length : 1596 bp Strand : + Note : ABC-type uncharacterized transport system, duplicated ATPase component COG4172; ABC transporter, ATP-binding protein of Proteobacteria UniRef RepID=B8F5L6_HAEPS DNA sequence : ATGGAATTATTAGCAGTAAATAATCTCGATGTTTATTTAAAAACGGACGAAGAATTAGTTCACGCAGTGCGTAATGTCTC GTTCTCGATTGAAAAAGGGCAAACCCTTGCGATTGTGGGGGAATCGGGTTCGGGTAAATCCGTTACTTCAATGGCAATTA TGCAGTTATTGCCTAAAAATATCGTCTCATTCGGTGAACGCTCAAGCATCATTTTTGAAGAACAAAACTTGCTTACTCTA TCTGAAAAAGCAATGCAAACAGTTCGAGGTGATCGCATCGGTATGATTTTCCAAGAGCCAATGACCTCACTCAATCCTTA TATGCCGATTGGCAAGCAGGTTGCTGAGACGGTTCAAACCCATAATCCGCAAATCAGCAATGCCGAAGCGGAAAAAATGG TGTTGGAAACTTTGCAAAAAGTAAAAATTCCCGATGCGGAAAAGAAAATGATTTGCTATCCGCACGAGTTTTCCGGCGGT CAGCTACAACGAATTATGATTGCAATGGCAATTATCAACAAACCCGATTTATTGATTGCCGATGAGCCGACCACCGCCCT GGATGTCACAACCCAAGCGGAAATTTTGGATTTAATGCACGACTTACAGCGTGATATGGGAATGGCGATTATCTTAATTT CCCACGATTTACGCTTGGTGCATAAATACAGTGACTTAGTCTGCGTAATGCAAAACGGCGAAATTATTGAGCGAGGCGAA ACGGAAACTGTGTTCACCAATCCGCAACATCCTTATACGGTGGAGCTACTTACCCCGATTCCAACTAATTTAAAAGGGGA ATTACCGCCAAATGCACCAACCTTGCTTCAGGGTGAGCATATTAAGGTAGATTATATTTTAAAACGCTCGCTATTCGGTA AGCCGAAAAAGGTGTTTAATGCGTTAAAAGATATTTCATTGCACTTGAAAACCGGCGAAACGCTCGGCATTGTAGGCGAA TCCGGCTCCGGGAAATCTACCCTTGGGCGTGCCATTATGCAGATTTTAGATTATCGCGGCAATATTACATTTGCAGGTAA GACACTGGCTAATCTGAATAAAGCCGAACGTCAAGCCCTGAAAAAAGATATGCAAATGGTGTTCCAAGACCCGTTCAACT CACTTTCTCCTCGCTTAACAGTTGGGGAAATTATTGCTGAGGGCTTAACCGTACATTGCCCTCAAATGAGCAAAACCGAA CGGCGGGAAAAAGTAATGAAAATGTTGGAAGAGGTTAATCTCAACCCTGCAATGATTAACCGCTATCCGCACGAATTTTC GGGCGGACAACGCCAGCGGATTGCGATTGCAAGGGCAATCATTTTAGAGCCGAAATTTGTATTGCTTGATGAGCCAACCT CAGCACTTGACCGCTCTACTCAGATCACTGTAATTGAATTGCTTAACCGCTTACAGAAAAAATACGGCTTAAGTTATATT TTCATCAGCCACGATTTGGCGGTCATCAAGGCACTTAGCGACCGAGTGATTGTAATGAGCCAAGGTGAGATTGTAGAAAG CGGTGATGTCACTCAAATTTTTGAAAATCCACAACAAGAATACACCAAGCGGTTGATTTTAGCCTCTAATTTGTAA Protein sequence : MELLAVNNLDVYLKTDEELVHAVRNVSFSIEKGQTLAIVGESGSGKSVTSMAIMQLLPKNIVSFGERSSIIFEEQNLLTL SEKAMQTVRGDRIGMIFQEPMTSLNPYMPIGKQVAETVQTHNPQISNAEAEKMVLETLQKVKIPDAEKKMICYPHEFSGG QLQRIMIAMAIINKPDLLIADEPTTALDVTTQAEILDLMHDLQRDMGMAIILISHDLRLVHKYSDLVCVMQNGEIIERGE TETVFTNPQHPYTVELLTPIPTNLKGELPPNAPTLLQGEHIKVDYILKRSLFGKPKKVFNALKDISLHLKTGETLGIVGE SGSGKSTLGRAIMQILDYRGNITFAGKTLANLNKAERQALKKDMQMVFQDPFNSLSPRLTVGEIIAEGLTVHCPQMSKTE RREKVMKMLEEVNLNPAMINRYPHEFSGGQRQRIAIARAIILEPKFVLLDEPTSALDRSTQITVIELLNRLQKKYGLSYI FISHDLAVIKALSDRVIVMSQGEIVESGDVTQIFENPQQEYTKRLILASNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-74 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-74 | 41 |
