Gene Information

Name : D648_1560 (D648_1560)
Accession : YP_007667669.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Virulence
Product : Leukotoxin-activating lysine-acyltransferase lktC serotype A1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 152111 - 152515 bp
Length : 405 bp
Strand : -
Note : Leukotoxin-activating lysine-acyltransferase lktC serotype A1 of Pasteurellaceae UniRef RepID=LKTC1_PASHA

DNA sequence : 
GTGATTCCTGCAATTGAAAATGAACAATATATGCTACTTATAGATAACGGTATTCCGATCGCTTATTGTAGTTGGGCAGA
TTTAAACCTTGAGACTGAGGTGAAATATATTAAGGATATTAATTCGTTAACACCAGAAGAATGGCAGTCTGGTGACAGAC
GCTGGATTATTGATTGGGTAGCACCATTCGGACATTCTCAATTACTTTATAAAAAAATGTGTCAGAAATACCCTGATATG
ATCGTCAGATCTATACGCTTTTATCCAAAGCAGAAAGAATTAGGCAAAATTGCCTACTTTAAAGGAGGTAAATTAGATAA
AAAAACAGCAAAAAAACGTTTTGATACATATCAAGAAGAGCTGGCAACAGCACTTAAAAATGAATTTAATTTTATTAAAA
AATAG

Protein sequence : 
MIPAIENEQYMLLIDNGIPIAYCSWADLNLETEVKYIKDINSLTPEEWQSGDRRWIIDWVAPFGHSQLLYKKMCQKYPDM
IVRSIRFYPKQKELGKIAYFKGGKLDKKTAKKRFDTYQEELATALKNEFNFIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 1e-26 52
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 2e-26 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D648_1560 YP_007667669.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG0842 Protein 3e-25 53
D648_1560 YP_007667669.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG1559 Protein 5e-27 52
D648_1560 YP_007667669.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG1499 Protein 6e-27 52