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Name : D648_14570 (D648_14570) Accession : YP_007668969.1 Strain : Mannheimia haemolytica USDA-ARS-USMARC-185 Genome accession: NC_020834 Putative virulence/resistance : Unknown Product : Capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 1460347 - 1461375 bp Length : 1029 bp Strand : - Note : Capsid proteins of root UniRef RepID=VPN_BPP2 DNA sequence : ATGAAAGATTTAACCCTTGAAAAATATAACGCCTACCTTGCACGCCAAGCTGAATTAAACAACTTGCCGTTTAATGCATT GGCAACCGGCATTAAATTCACAGTGCAACCATCGGTACAGCAAAAGCTGTATGAAAAGGTGCGTGAAAGCTCTGATTTCT TAAAATCTATCAGCTTTGTGTTTGTTGATGAGCAAACCGGTGAAACCTTAGGTTTAGATTCAGCTCACACCGTGGCCAGC ACCACCGATACCAGCGGTGACGGTGAACGCAAAACCACCGCTATTGCGAAGTTGGTAAAACAAACCTACCACTGCCAACA AATCAATTTTGACACCCATATCACTTATAAACAGTTGGATATGTGGGCGAAATTCCCTGATTTTCAGCAAAAAGTGGCGA ATGTTGCGGTAAAACAACGCAAACGTGACTTAATTATGATCGGCTTTAACGGCACAAGTCGTGCGGCAACCAGTGATCGC AACAGCAACCCGTTATTGCAAGATGTGGCAAAAGGCTGGTTGCAGAAAATGCGTGAAGATGCCAAAGAGCGTGTAATGAA TGGCGAAAGCACAGACAACCAAGTTTTAGTCGGCAAAGGTCAAGAGTATGCCAACCTTGACGCACTCGTAATGGACGCCA CCGAAGAACTTATTGATGAATGGCATCGTGATGACACCGATTTAGTGGTGATTACCGGTCGCAAGTTGCTTGCGGATAAA TATTTCCCGATTGTGAATCAGCAAAACGCACCAACCGAACAACTTGCCGCTGATATTGTGATCTCACAAAAACGCATTGG GGGCTTAAAAGCGGTGCGTGTGCCGTTCTTCCCGGCGAATGCGATTTTAATCACTAAGCTGGAAAATTTAGCCATCTATG TGCAAGAGGGGACAACCCGCAAGCATATTGAGAACGTGCCGAAAAAAGACCGTATTGAAACCTACGAATCAGAAAATATC GACTACGTTGTCGAAGATTATGGCTGTGCGGCATTAATCGAAAACATTACACTCAAAGATAAAGAGTAA Protein sequence : MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLYEKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVAS TTDTSGDGERKTTAIAKLVKQTYHCQQINFDTHITYKQLDMWAKFPDFQQKVANVAVKQRKRDLIMIGFNGTSRAATSDR NSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELIDEWHRDDTDLVVITGRKLLADK YFPIVNQQNAPTEQLAADIVISQKRIGGLKAVRVPFFPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENI DYVVEDYGCAALIENITLKDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 3e-80 | 54 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 3e-80 | 54 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 9e-75 | 49 |
