Gene Information

Name : D648_11820 (D648_11820)
Accession : YP_007668694.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Unknown
Product : Replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1180160 - 1181623 bp
Length : 1464 bp
Strand : +
Note : replicative DNA helicase PRK06904; Replicative DNA helicase of Gammaproteobacteria UniRef RepID=A6VP89_ACTSZ

DNA sequence :
ATGGCAGAATATAGCGGAACAACCCAAGAGAAGATGAAAGATAAGCAGGTTGAGCAAATTAATATCTCACCACATTCGAT
TGAGGCAGAGCAAGCGGTGCTTGGTGGCATTATGCTCAGTAATGATCACTGGGATAATGTTGCTGAGCGTGTACAACCGC
ACGATTTTTACAACTATGCGCATCGAATTATTTTTGAACAAATGGCGGAGTTGGTGCGCCACAATAAACCGATTGATATT
ATTACGCTGGATCAAGCCTTAAAAGACAAAGGGGTGCTGCAAGATGTAGGAGGTTTTGCCTATTTAGCCGAGCTTTCTAA
AAATACCCCGAGTGCAGCAAATATTTTAGCCTATGCGGATATTGTGCGAGATCGTTCCGATTTAAGAAGTGTAATCAGTG
CCGGCAATCAAATTGCGGAAATGGGCTACAAAACGAAAGGGCGTAACTCCAAAGAAGTGTTAGACGAGGCAGAGCGAATT
GTGTTTGAAATTGCAGAAAAACGCAATAACGCCAATGAAGGTCCACAACGTATTGACGATATTTTGCTTAAAACACTCGC
TCGAATGGATACGCTATCTAAAAATCGCCATAACGGCGGAGTTACTGGTGTTTCTACCGGGTTTGTTGATCTCAATAAAA
AAACCGCAGGGTTACAGCCTTCGGATTTAATCATTGTGGCAGCCCGTCCTTCAATGGGGAAAACTACTTTTGCAATGAAC
TTATGTGAAAATGCCTCATTAGTGGATATTGAAGATAAAGATGATTTAGACGAACAGGGTAATCCGAAGAAAAAACCGGC
AAAGCCAGTGCTAATTTTCAGCCTGGAGATGCCGGCAGACCAAATTATGATGCGTATGCTTGCCTCACTTTCTCGGGTCG
ATCAAACCAAGATCCGAACCGGTCAGATTTCAGATGATGAAGACACTGCTAAAATCTCCAGCACAATGGCAATTTTACAA
GAACGTAATAATATCTATATTGATGATAGCTCCGGTTTAACACCGACCGAATTACGTTCTCGAGCGAGACGGATTTATCG
TGAAAATGGCGGATTAAGCTTGATTATGGTGGACTATCTCCAATTAATGCGAGCGCCGGGATTTGCAGATAATCGTACTT
TAGAAATCGCAGAAATTTCCCGTTCTTTAAAGGCACTAGCGAAAGAATTAGAAGTGCCAGTAGTCGCTCTTTCTCAGCTA
AACCGGAGTTTGGAACAACGTGCCGATAAACGTCCGGTAAACTCGGATTTGCGTGAGTCAGGTTCTATTGAGCAAGATGC
AGACTTAATTATGTTTATTTATCGTGATGAGGTCTATAACGACAATTCCGATCTGAAAGGCATTGCGGAAATTATTATCG
GAAAACAACGTAACGGCCCGATTGGTCGGGTGCGTTTAACGTTCCAAGGGCAGTATTCCCGTTTTGATAATTACACAGGA
GGGCATTATGATGATGAATACTAA

Protein sequence :
MAEYSGTTQEKMKDKQVEQINISPHSIEAEQAVLGGIMLSNDHWDNVAERVQPHDFYNYAHRIIFEQMAELVRHNKPIDI
ITLDQALKDKGVLQDVGGFAYLAELSKNTPSAANILAYADIVRDRSDLRSVISAGNQIAEMGYKTKGRNSKEVLDEAERI
VFEIAEKRNNANEGPQRIDDILLKTLARMDTLSKNRHNGGVTGVSTGFVDLNKKTAGLQPSDLIIVAARPSMGKTTFAMN
LCENASLVDIEDKDDLDEQGNPKKKPAKPVLIFSLEMPADQIMMRMLASLSRVDQTKIRTGQISDDEDTAKISSTMAILQ
ERNNIYIDDSSGLTPTELRSRARRIYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEVPVVALSQL
NRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSDLKGIAEIIIGKQRNGPIGRVRLTFQGQYSRFDNYTG
GHYDDEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 7e-96 51
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 6e-97 50
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-97 50
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 3e-96 49
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-93 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-82 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-88 46
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-88 46
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 9e-81 44