Gene Information

Name : D648_11140 (D648_11140)
Accession : YP_007668626.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1107161 - 1108678 bp
Length : 1518 bp
Strand : +
Note : conjugal transfer mating pair stabilization protein TraG PRK13735; uncharacterized protein of Pasteurellaceae UniRef RepID=Q0I5Q2_HAES1

DNA sequence :
ATGACCTTTACCGTAGATAGTTACTTAGAATATTTTCTGACTTTACTAGCTTGGATTATTAACAACAATATTTTTGCTGT
GCTGGTTCAAACAGGTCTGTTCGTTCTACCGTTGATTTTTGTTTTAATCGGCACCTGGATGGAAGTCAAAAAACAAGGTG
AAGATGAGGGAAATAAAGGAGATTTACTCATTACTTGGCTCAGCCTCAAATTCTATCCGGCAATGTTTGTCGTTGTGTTG
GTCTTGGCTCCAATGATTCCGATCAACCTAAACAATATTGAGTTGAATGTAGAACGCTCTAAAGCTTGTGGCTATCGTGT
CCCAACAGCGCCAGAGGATAGCGGTTACAACCAAATGAATTCTGAATTGGGTAATCAACAAGCGAGAGTCCCTATCTGGT
GGGGATTATTCCATCAAATCAACAAAGGGGTAACACACGCCTTAACAGCTTCAATTCCATGCAAACCAGATTTACGTCAA
GTTCGTTTTGAAGTTCAACACGAGAAAATCAATAATCCAGCATTATTGACAGAGGTTCGCTTATTTGTACAACAATGCTA
TGTACCGGCACGTCAGAAAATTCAAAGTAGCCAACTTTCATTGAGCCCGGCACAGGTTCGTGAAACTAGCTGGTTAGGTG
GCCGTATTTTAATTGCAAATAGCGAGCTTTATCCTCGTTATCGAGCCCAACAACCTCATAGTCTATTTCCTTATAATGCT
TCCCGGGATAATGGATTGCCGAATAATGGAGAAGGTGGTTTTCCAAATTGTGCAGAGTGGTGGGATACGGCGAATAATGG
TTTAAAAGATCGCTTATTAGCTGATGTCAAACAGAACTTCTCTGCAAAAGTGATTGATTTTTTCAGTAGTAAAGACAATT
CCGATGAATCCATACTCCGTACCGTATTACGAGCTGAGAATATGGATATTTCGAGAGGGAAAGTTTATCCCGGGTATGGG
GGGAATTTAGATCCTACATTTGCAAATGCAACGACTCGATTAACATCTTCAGTGGGAAGCTTAGCTGCCAGCTTTGCAGC
CTTTCCAGCATTCGATGCAATGCGACAAGCACTGCCGATGGTACATGCTTTTATGTTGATGGCTGTGATCATCATTACTC
CGCTGGTTATTGTGATGAGTGGTTATTCTCTCAAAACATTAGTTACATTAACTTTTGTGAGTTTTGCTTTGGTATCACTG
ACATTCTGGTGGGAATTAGCAAGATGGTTAGATTCTTGGCTACTATCCGCTCTATATGATTCCAGTGCACATAGTCGAAT
AAATCCGTATTTCCTTGAAAATACGCAAGATGATTTTATCGTCAATTTTGTGATGGGTTCGATGTTCTTGGTTTTACCGG
CGATTTGGCTAGGCAGTATGTCGTGGGCTGGAGTAAAAATAGGAGATATAGCTGCCGGTTTTACTACTGGTTCATTAGAT
AGTAAATCCGCAGGCTCTCAAGGTGGTAATTTAGTTAAGAAAGGCGGTAAGGAAATATCTGCAGGGTTTAACAAATAA

Protein sequence :
MTFTVDSYLEYFLTLLAWIINNNIFAVLVQTGLFVLPLIFVLIGTWMEVKKQGEDEGNKGDLLITWLSLKFYPAMFVVVL
VLAPMIPINLNNIELNVERSKACGYRVPTAPEDSGYNQMNSELGNQQARVPIWWGLFHQINKGVTHALTASIPCKPDLRQ
VRFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQSSQLSLSPAQVRETSWLGGRILIANSELYPRYRAQQPHSLFPYNA
SRDNGLPNNGEGGFPNCAEWWDTANNGLKDRLLADVKQNFSAKVIDFFSSKDNSDESILRTVLRAENMDISRGKVYPGYG
GNLDPTFANATTRLTSSVGSLAASFAAFPAFDAMRQALPMVHAFMLMAVIIITPLVIVMSGYSLKTLVTLTFVSFALVSL
TFWWELARWLDSWLLSALYDSSAHSRINPYFLENTQDDFIVNFVMGSMFLVLPAIWLGSMSWAGVKIGDIAAGFTTGSLD
SKSAGSQGGNLVKKGGKEISAGFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03040 YP_005176203.1 TraG-like domain-containing protein Not tested ICEPmu1 Protein 0.0 91
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 8e-110 45
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 8e-110 45
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 6e-98 44
api56 CAF28530.1 putative membrane protein Not tested YAPI Protein 4e-97 42
YpsIP31758_3699 YP_001402653.1 hypothetical protein Not tested YAPI Protein 7e-98 42
YE3465 YP_001007626.1 hypothetical protein Not tested YAPI Protein 1e-97 41