Gene Information

Name : D648_11100 (D648_11100)
Accession : YP_007668622.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Unknown
Product : lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1103201 - 1103578 bp
Length : 378 bp
Strand : +
Note : Possible lipoprotein of Pasteurellaceae UniRef RepID=A7JST8_PASHA

DNA sequence : 
ATGATGAGTGCCTTATTGATAACAGGTTGCACAACTTCAACTGAAGAATTATTACCCGCTAACGGCAGTACGATGCGAGA
TATTTGGGATAAAGGAGCAGGTAATAACGATCTACACTTATACCGTTCACAACAAGGACGAACACTCGATCCTGTCGATT
ATATTCCTAACACTGAGCAACGAGCCTATACCCGTACGGCAGAAAATGAAATTAATAACTTGTTCCCTCGTTTACCTAAT
CCGGATCTGATTATGTATGTGTATCCACACCAAACTCGTTCCGGAGAGCCTCTTAGTATTCCAGGATATTCTACGGTATT
ACCTTTCTACGGGCGAGTCCAATATGCTCAACCGGGTGATCGAACAAGAGGGCTTTGA

Protein sequence : 
MMSALLITGCTTSTEELLPANGSTMRDIWDKGAGNNDLHLYRSQQGRTLDPVDYIPNTEQRAYTRTAENEINNLFPRLPN
PDLIMYVYPHQTRSGEPLSIPGYSTVLPFYGRVQYAQPGDRTRGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 1e-53 97
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-24 48
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 2e-20 48
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-19 48
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 5e-20 47
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-24 47
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-19 46
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 3e-22 46
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 6e-23 43
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 9e-22 42
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 2e-21 42