Gene Information

Name : D648_10410 (D648_10410)
Accession : YP_007668553.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Unknown
Product : DNA topoisomerase 3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1038414 - 1040333 bp
Length : 1920 bp
Strand : -
Note : DNA topoisomerase III PRK07726; DNA topoisomerase 3 of Gammaproteobacteria UniRef RepID=TOP3_HAEIN

DNA sequence :
ATGCGTTTATTTGTTGCCGAAAAACCCAGCCTTGCCCGAGCGATTGCCGATGTGTTACCAAAACCCCATACCAAAGGAGA
TGGCTTTATCCAATGCGGCGAACACGACACTGTTACTTGGTGTATCGGTCATTTATTGGAACAGGCTGAACCCGATGTCT
ATGATGAGCGTTTCAAAATGTGGCGAATGGAACATTTGCCGATTGTGCCTGAACAATGGAAATTGATTCCCAAAAAAGAG
ACGCTCAAGCAGTTTAAAGTGGTGGAAAAGCTGATTAAAAAAGCCGATGTTTTAGTCAATGCCGGAGACCCGGATCGAGA
AGGGCAGCTGTTGGTGGACGAAGTTTTTGGCTATTTGAATTTATCTGCTGAACGCAAAAGCCAAATTCAGCGTTGTTTGG
TAAGCGATCTCAACCCGAATGCGGTGAGCCGAGCCATTGAAAAATTGCAAAAAAACAGCGATTTTATACCGCTTGCAACC
TCTGCTCTCGCCCGAGCCAGAGCGGATTGGCTGTATGGTATCAATATGACCCGAGCCTATACCCTACAGGGGCGTTGGGC
AGGCTATAAAGGCGTGTTATCAGTCGGACGTGTGCAAACGCCGGTATTAGGGCTGATTGTTCGCCGAGATCTGGAGATCG
AGCATTTCGTGCCAAAGGATTATTTTGAGGTGTTGGCACAGATTGTCGTGCCGGAAACCCAAGAGCGATTTAAGGCGCAG
TGGCAACCGAGCAAAGCCTGTGAAGATTATCAAGATGAAGATGGGCGGGTGCTGTCTCGTCCATTGGCAGAAAATGTGGT
AAAACGGATTACCGACCAGCCGGCAACCGTCACCGAATATCAAAATAAAATTGAAAAAGAAACTGCACCGCTGCCTTATT
CTCTTTCGGTATTACAAATGGAAGCCGCCGGCAGATATGGGCTATCCGCCCAAGCGGTGTTGGATATTTGCCAAAAGCTG
TATGAAACCCATAAACTAATTACCTACCCTCGTTCTGATAATCGGTATTTGCCGACCGAACATTTCAACGACAGATTTAA
AGTGATGGCGGCGATTGCTCATCATTTACCTGAATATCAACAAAAACCGGAAGTGATTGATGCCACTATTCGCAATCGTT
GCTGGAATGATAAAGAGGTGGAAGCCCACCACGCCATTATTCCCACTGCACGGCAAGGGACGGTACATTTAACCGAAAAT
GAAAAAAGAGTTTATCAACTCATTGCCCGCCAATATCTAATGCAATTCTGCCCTGATGCGGAATATCGCAAAAGTAAAAT
CGGGCTTGAAATTGCAGGTGGTAGTTTTGTCGCTCAAGCACGCAACCTTGTAATTGCCGGCTGGCGAGCGTTACTGGGTA
AAGAAGATAGCCTTGACGATGCAGAGCCACTACTACCGATTGTCAAAAAAGGGCAAATCCTCCATTGTGAAAAAGGGGAA
ATTGTCAGCAAAAAAACACAACCGCCCCGCCACTTTACTGATCGCAGTTTGCTTTCAGCAATGACCGGGATCGCCCGTTT
TGTACAAGATAAAGAATTGAAAAAAATCTTGCGTGAAACCGATGGTTTAGGCACGGAGGCAACCCGAGCCGGTATTATCG
AATTGCTGTTTAAACGTGGTTTTTTAATCCGTAAAGGGAAAAATATCCACAGTACCGAAGCCGGCAGAATATTGATTCAA
GCACTTCCCGACTCTGCTACCCAGCCGGATATGACCGCTCATTGGGAAATGCAGCTGAATCAAATCAGCAAAAAAGAGAC
CAGCTATCAGCAATTTATGTTTGATCTAAACCAACAGCTCCCACATTTATTACAAAGCCCAAACCGCCAAGTGTTGCAAA
ATTTAGCGAAAATCACACCGCTTGCAAGCGGCAATAAACCTCGTTATTTTAAAAAGCGAACACAAACTGCTGAAAATTAA

Protein sequence :
MRLFVAEKPSLARAIADVLPKPHTKGDGFIQCGEHDTVTWCIGHLLEQAEPDVYDERFKMWRMEHLPIVPEQWKLIPKKE
TLKQFKVVEKLIKKADVLVNAGDPDREGQLLVDEVFGYLNLSAERKSQIQRCLVSDLNPNAVSRAIEKLQKNSDFIPLAT
SALARARADWLYGINMTRAYTLQGRWAGYKGVLSVGRVQTPVLGLIVRRDLEIEHFVPKDYFEVLAQIVVPETQERFKAQ
WQPSKACEDYQDEDGRVLSRPLAENVVKRITDQPATVTEYQNKIEKETAPLPYSLSVLQMEAAGRYGLSAQAVLDICQKL
YETHKLITYPRSDNRYLPTEHFNDRFKVMAAIAHHLPEYQQKPEVIDATIRNRCWNDKEVEAHHAIIPTARQGTVHLTEN
EKRVYQLIARQYLMQFCPDAEYRKSKIGLEIAGGSFVAQARNLVIAGWRALLGKEDSLDDAEPLLPIVKKGQILHCEKGE
IVSKKTQPPRHFTDRSLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFLIRKGKNIHSTEAGRILIQ
ALPDSATQPDMTAHWEMQLNQISKKETSYQQFMFDLNQQLPHLLQSPNRQVLQNLAKITPLASGNKPRYFKKRTQTAEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 3e-109 42
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 3e-109 42
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 2e-109 42
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 6e-107 42