Gene Information

Name : D648_100 (D648_100)
Accession : YP_007667523.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-185
Genome accession: NC_020834
Putative virulence/resistance : Virulence
Product : ATP-binding protein BexA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 12761 - 13408 bp
Length : 648 bp
Strand : +
Note : Vi polysaccharide export ATP-binding protein VexC PRK15177; ATP-binding protein BexA of Bacteria UniRef RepID=BEXA_HAEIF

DNA sequence : 
ATGATTAGTATTAGAAATGTAAGTAAGCAATATCGAACTAATAACGGTTGGAAAACCATATTAAAAGATATAAATTTTGA
GCTGAAAAAAGGCGAAAAAGTGGGGATTTTAGGGCGGAATGGTGCAGGAAAATCAACCTTAATCCGTTTAATGAGCGGGG
TAGAACCCCCATCAACAGGCACAATAGAACGCCAAATGTCTATTTCTTGGCCCCTAGCGTTTAGCGGTGCTTTCCAAGGA
AGTTTAACCGGTATGGATAACCTACGGTTTGTAAGTAGAATTTATGGTGCAGATTTTGATTATGTAAAATCATTTACCGA
AGAATTTTCTGAACTCGGGGAATACCTATATGAGCCGGTCAAAAACTATTCTTCTGGTATGAAAGCAAGACTCGCTTTTG
CTTTATCTCTCTCTATTGAATTTGATTGTTATTTAATTGACGAAGTAATTGCTGTGGGCGATGCCCGATTTGCAGCAAAA
TGCAAGTATGAGCTTTTTGAAAAACGGAAAGACCGTTCATTGATTTTAGTTTCTCATAGCCCAGCCTCAATTAAAGAATA
TTGCGATTCTGCAATGGTTTTAGAAGAGGGTATCATGTATACATTTGATTCTATTGATAACGCATACAATTTTTACAATA
AAACATAA

Protein sequence : 
MISIRNVSKQYRTNNGWKTILKDINFELKKGEKVGILGRNGAGKSTLIRLMSGVEPPSTGTIERQMSISWPLAFSGAFQG
SLTGMDNLRFVSRIYGADFDYVKSFTEEFSELGEYLYEPVKNYSSGMKARLAFALSLSIEFDCYLIDEVIAVGDARFAAK
CKYELFEKRKDRSLILVSHSPASIKEYCDSAMVLEEGIMYTFDSIDNAYNFYNKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 8e-83 78
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-45 49
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-46 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D648_100 YP_007667523.1 ATP-binding protein BexA VFG0696 Protein 6e-85 80
D648_100 YP_007667523.1 ATP-binding protein BexA VFG0258 Protein 3e-83 78
D648_100 YP_007667523.1 ATP-binding protein BexA VFG2563 Protein 1e-60 57
D648_100 YP_007667523.1 ATP-binding protein BexA VFG1449 Protein 6e-46 49