|
Name : D650_4460 (D650_4460) Accession : YP_007665224.1 Strain : Mannheimia haemolytica USDA-ARS-USMARC-183 Genome accession: NC_020833 Putative virulence/resistance : Unknown Product : Integrase Function : - COG functional category : - COG ID : - EC number : - Position : 440527 - 441753 bp Length : 1227 bp Strand : - Note : integrase PRK09692; Integrase of Pasteurellaceae UniRef RepID=Q0I4P6_HAES1 DNA sequence : ATGGCTAGAAAAATCACACCGTTAAACGATACCCAAATAAGAAAAGCGAAACCGGAAGACAGCCCATTAAGAGACGGTAA CGGCTTACTACTTGTTATTACCTCAAATTCTAAATTGTGGCGGTTTAGGTATGAAAGACCGTTCACAAAAAAGCGGAATG ATTTAAGCATTGGGGCTTACCCTGATATTTCTTTAGCACAAGCGAGAGAAATTAGAGAAGAATATAGGGCATTATTGGCT CAAAATATCGACCCTCAAACCCACCGCCAACAACAGGAACAGGCAAAGGCCAACGAAATCAGCAACACTTATGAAAATGT AGCGTGGGCGTGGCTGGAACACCGCAAGACCAAGAAGAATTTTTCAGACAACTACCAAAAAGATGTAATCGCCTTAATTA AAAATAACCTCTTGCCGCACTTTGGAAGAATGCCTATCACACAAATAACCGCACCAATGGCAATCAAGGCATTCAAGCAA TACCAAGACGAGGGCAAACTAGAGAAGTTAAAACGGGCAATTCAAAAACATAATGAAATTATGATGTTTGCCGTACACCG TGAAATGATACCGTTTAACCCTACCGCCAATATTGCGAAAGAGTTTGATAGCCCAACGGTTGAACATTTCAAAACCATTA AGCCGGAAGATTTAGGCGAGTTTTTATACACCTTACAAAACGCCCAAATTCATTTACAGACACGCTATTTAATTCTGTGG CAGTTACTCACAATGACCCGCCCGAATGAAGCGGCTAAGGCAAAATGGGCGGATATAGACGAAAAAGCCAAACTGTGGAC GATACCGGCGGAAAATATGAAGCGAGGCATTGAGCATAAAATCACACTCTCACGCCAAGCAATCGCACTTTTGCGAGAGA TTAAAAAGCTAAGTGGCGGTAAAACGTATTTATTCCCTAGCGTGAAGAACCCACAAACGCACGTCAATACTCAAACCGCC AACGGTGCGATCAAACGAATGGGCTACAAGGGCAAATTAGTGGCTCACGGCTTGCGGGCCATCGCCTCCACTTATCTTAA TGAGAAAGGCTACAATAGCGATTTAATCGAGGTTGCCTTATCGCATTTAAACAGCGACCGAATCAAAGCCGCCTATGATA GAGGCGAACGCCTAGAGCAACGTTTTAAACTGCTCCAAGTGTGGGCGGATTTTGTAGAGGAATGTTCGCAAGGTAGCTTA CCGCAATATCATTTGAAAATAGCCTAG Protein sequence : MARKITPLNDTQIRKAKPEDSPLRDGNGLLLVITSNSKLWRFRYERPFTKKRNDLSIGAYPDISLAQAREIREEYRALLA QNIDPQTHRQQQEQAKANEISNTYENVAWAWLEHRKTKKNFSDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQ YQDEGKLEKLKRAIQKHNEIMMFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDLGEFLYTLQNAQIHLQTRYLILW QLLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRGIEHKITLSRQAIALLREIKKLSGGKTYLFPSVKNPQTHVNTQTA NGAIKRMGYKGKLVAHGLRAIASTYLNEKGYNSDLIEVALSHLNSDRIKAAYDRGERLEQRFKLLQVWADFVEECSQGSL PQYHLKIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 6e-76 | 45 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 3e-66 | 42 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 3e-66 | 42 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 5e-66 | 42 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 1e-72 | 42 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 1e-72 | 42 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 1e-72 | 42 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 1e-72 | 42 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 1e-72 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| D650_4460 | YP_007665224.1 | Integrase | VFG1092 | Protein | 1e-66 | 42 |
