Gene Information

Name : D650_26590 (D650_26590)
Accession : YP_007667435.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-183
Genome accession: NC_020833
Putative virulence/resistance : Virulence
Product : Leukotoxin-activating lysine-acyltransferase lktC serotype A1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2577947 - 2578351 bp
Length : 405 bp
Strand : +
Note : Leukotoxin-activating lysine-acyltransferase lktC serotype A1 of Pasteurellaceae UniRef RepID=LKTC1_PASHA

DNA sequence :
GTGATTCCTGCAATTGAAAATGAACAATATATGCTACTTATAGATAACGGTATTCCGATCGCTTATTGTAGTTGGGCAGA
TTTAAACCTTGAGACTGAGGTGAAATATATTAAGGATATTAATTCGTTAACACCAGAAGAATGGCAGTCTGGTGACAGAC
GCTGGATTATTGATTGGGTAGCACCATTCGGACATTCTCAATTACTTTATAAAAAAATGTGTCAGAAATACCCTGATATG
ATCGTCAGATCTATACGCTTTTATCCAAAGCAGAAAGAATTAGGCAAAATTGCCTACTTTAAAGGAGGTAAATTAGATAA
AAAAACAGCAAAAAAACGTTTTGATACATATCAAGAAGAGCTGGCAACAGCACTTAAAAATGAATTTAATTTTATTAAAA
AATAG

Protein sequence :
MIPAIENEQYMLLIDNGIPIAYCSWADLNLETEVKYIKDINSLTPEEWQSGDRRWIIDWVAPFGHSQLLYKKMCQKYPDM
IVRSIRFYPKQKELGKIAYFKGGKLDKKTAKKRFDTYQEELATALKNEFNFIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyC CAD42040.1 HlyC protein Virulence PAI II 536 Protein 1e-26 52
hlyC CAD33758.1 hemolysin C Virulence PAI I 536 Protein 2e-26 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D650_26590 YP_007667435.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG0842 Protein 3e-25 53
D650_26590 YP_007667435.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG1559 Protein 5e-27 52
D650_26590 YP_007667435.1 Leukotoxin-activating lysine-acyltransferase lktC serotype A1 VFG1499 Protein 6e-27 52