Gene Information

Name : D650_16420 (D650_16420)
Accession : YP_007666419.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-183
Genome accession: NC_020833
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1585036 - 1586553 bp
Length : 1518 bp
Strand : -
Note : conjugal transfer mating pair stabilization protein TraG PRK13735; uncharacterized protein of Pasteurellaceae UniRef RepID=Q0I5Q2_HAES1

DNA sequence :
ATGACCTTTACCGTAGATAGCTACTTAGAATACTTTTTGACCTTACTAGCTTGGATCATTAACAATAATATTTTTGCTGT
ACTGGTTCAAACCGGTCTATTCATACTACCGCTGATTTTTGTTTTAATCGGCACATGGATGGAAGTTAAAAAGCAAGGGG
AGGACGAAGGTAATAAAGGAGATTTACTTATTACTTGGCTCAGCCTTAAATTTTATCCGGCGATGTTTGTTGTAGTGTTA
GTTTTGGCCCCGATGATACCTATCAACCTTAACAATATTGAGCTGAATGTTGAACGTTCCAAAGCCTGTGGCTACCGTAT
TCCAACCTCACCAGAGGATAGTGGTTATAATCAAATGAACTCTGAATTGGGCAACCAGCAAGCGAGAGTACCGCTTTGGT
GGGGATTATTCCATCAAATCAACAAAGGAGTTACACACGCATTAACAGCTTCAATTCCGTGTAAACCGGATTTACGTCAA
GTTCGCTTTGAGGTCCAACATGAAAAAATCAATAATCCTGCATTATTGACTGAGGTTCGCTTATTTGTACAACAATGTTA
TGTACCTGCACGTCAGAAAATTCAAAGCAGTCAGCTCTCATTGACTCCGGCACAGGTGCGTGAAACCAGCTGGTTAGGTG
GTCGTATTCTTTTGACAAACAGTGAGCTTTATCCCCGTTATCGAGCTCAACAACCTCATAGTCTATTTCCCTACAATGCT
TCCCGGGATAATGGATTGCCGAATAATGGGGAAGGTGGTTTTCCAAATTGTGCAGAGTGGTGGGATACGGCGAATACTGG
TTTAAAAGATCGTTTATTAGCTGATGTCAAACAGAACTTCTCTGCAAAAGTGATTGATTTTTTTAGCAGCAAAGAAAATG
CGGATGAATCCATACTCCGTACTGTATTACGAGCAGAGAATATGGATATTTCGAGAGGGAAAGTTTATCCCGGGTATGGG
GGGAATTTAGATCCTACATTTGCAAATGCAACGACTCGATTAACATCTTCAGTGGGAAGCTTAGCTGCCAGCTTTGCAGC
CTTTCCAGCATTCGATGCAATGCGACAAGCACTGCCGATGGTACATGCTTTTATGTTGATGGCTGTGATCATCATTACTC
CGCTGGTTATTGTGATGAGTGGTTATTCTTTCAAAACATTAGTTACATTAACTTTTGTGAGTTTTGCTTTGGTATCACTG
ACATTCTGGTGGGAATTAGCAAGATGGTTAGATTCTTGGCTACTATCCGCTCTATATGATTCCAGTGCACATAGTCGAAT
AAATCCGTATTTCCTTGAAAATACGCAAGATGATTTTATCGTCAATTTTGTGATGGGTTCGATGTTCTTGGTTTTACCGG
CGATTTGGCTAGGCAGTATGTCGTGGGCTGGAGTAAAAATAGGAGATATAGCTGCCGGTTTTACTACTGATTCATTAGAT
AGTAAATCCGCAGGCTCTCAAGGTGGTAATTTAGTTAAGAAAGGCGGTAAGGAAATATCTGCAGGGTTTAACAAATAA

Protein sequence :
MTFTVDSYLEYFLTLLAWIINNNIFAVLVQTGLFILPLIFVLIGTWMEVKKQGEDEGNKGDLLITWLSLKFYPAMFVVVL
VLAPMIPINLNNIELNVERSKACGYRIPTSPEDSGYNQMNSELGNQQARVPLWWGLFHQINKGVTHALTASIPCKPDLRQ
VRFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQSSQLSLTPAQVRETSWLGGRILLTNSELYPRYRAQQPHSLFPYNA
SRDNGLPNNGEGGFPNCAEWWDTANTGLKDRLLADVKQNFSAKVIDFFSSKENADESILRTVLRAENMDISRGKVYPGYG
GNLDPTFANATTRLTSSVGSLAASFAAFPAFDAMRQALPMVHAFMLMAVIIITPLVIVMSGYSFKTLVTLTFVSFALVSL
TFWWELARWLDSWLLSALYDSSAHSRINPYFLENTQDDFIVNFVMGSMFLVLPAIWLGSMSWAGVKIGDIAAGFTTDSLD
SKSAGSQGGNLVKKGGKEISAGFNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03040 YP_005176203.1 TraG-like domain-containing protein Not tested ICEPmu1 Protein 0.0 89
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 3e-111 46
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 3e-111 46
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 2e-99 44
YpsIP31758_3699 YP_001402653.1 hypothetical protein Not tested YAPI Protein 1e-96 41
api56 CAF28530.1 putative membrane protein Not tested YAPI Protein 7e-96 41