Gene Information

Name : D650_13710 (D650_13710)
Accession : YP_007666148.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-183
Genome accession: NC_020833
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1329955 - 1331457 bp
Length : 1503 bp
Strand : -
Note : lysyl-tRNA synthetase PRK00484; Lysyl-tRNA synthetase of Bacteria UniRef RepID=SYK_BLOPB

DNA sequence :
ATGTCTGAAGTAGAAAATCAAGAATTAGATCTAAACGGTGAAATGTTAGCCCGCCGTGAAAAATTAAACAAAATCCGTGA
GCAGGGTAACGCATTTCCAAATACATTCCGTCGTGATGCGTTAGCCAAAGATCTGCACGCTCAATATGATGCAGTGGAAG
GTGAAACCTTAAAAGAACAGAATATTCAAGTGAAAGTTGCCGGTCGTATTATGTTAAAACGAGTAATGGGTAAGGCATCT
TTCTTTACCATTCAAGATGTGAGCGGTGCGATTCAGCTTTATGTAGCTCGTGATAACTTAAGTGACAGCGTTTACGAAGA
AAAAGTCAGCCTTTGGGATTTAGGCGACATTGTGGGCGTCGAAGGTGCGTTATTTAAAACCAAAACCGGTGAATTAACGG
TTCGTTGCTCTGAAGTTCAACTTTTAACCAAGTCTTTACGCCCGTTGCCGGATAAACATCACGGTTTAACGGATTTAGAA
ACTCGTTATCGTCAGCGTTATTTAGACTTGATTTCTAATGAAGAATCTCGCCGTACTTTTATGATCCGCTCGCAAGTAGT
TTCAGGCATTCGCAAATTCTTCTTAGAAAGAGACTTTATTGAAGTTGAAACGCCAATGTTGCAAGTGATCCCGGGCGGTG
CGGCAGCGAAACCGTTTATCACTCATCATAATGCGTTAGATGTGGATATGTATCTGCGTATTGCTCCAGAGCTTTACTTA
AAACGTTTAGTTGTGGGTGGTTTTGAGCGAGTATTTGAGCTTAACCGTAACTTCCGTAACGAAGGGGTTTCAGTACGCCA
CAATCCTGAATTTACAATGATTGAGTACTACCAAGCCTATGCGGATTATCACGATTTAATGGATAATACCGAAGAACTGT
TACGCCAATTAGCCTTAGATATTCTTGGCACAACTGACGTACCTTATGGTGATTATGTATTCGATTTCGGTAAACCGTTT
GAGCGTATTACGATGCACGATGCGATTGTGAAATATGGTAACGGCATTCAACGTGAAGATTTAGACAGCTTCGAGAAAAG
TGTGGAAATTGCGAAAGGCTTAGGCATTGAAATTCAAAAATCTTGGGGTTTAGGCTCGGTAGTCAATGCGATTTTTGAAG
AAGTGGCAGAACATCAATTAATTCAGCCAACTTTCTTGATGGCTCACCCGGCAGAAATTTCACCATTAGCTCGCCGTAAT
GATGAAAACCCAGAGGTAACTGATCGTTTTGAGTTATTTATCGGTGGTCGTGAAATTGGTAATGGTTTCTCAGAATTAAA
CGATGCAGAAGACCAAGCAGAGCGTTTTGATGCTCAAGTTGCGGCGAAAGATGCCGGTGATGATGAAGCAATGTTTAAAG
ATGAAGACTTTATCGTGGCATTGGAACACGGTCTGCCGCCAACAGCGGGTGAAGGTTTAGGAATTGACCGCTTAGTAATG
ATTTTCGCTAACGCCCCATCAATCCGTGATGTAATTTTATTCCCAGCGATGCGTCAGAAGTAA

Protein sequence :
MSEVENQELDLNGEMLARREKLNKIREQGNAFPNTFRRDALAKDLHAQYDAVEGETLKEQNIQVKVAGRIMLKRVMGKAS
FFTIQDVSGAIQLYVARDNLSDSVYEEKVSLWDLGDIVGVEGALFKTKTGELTVRCSEVQLLTKSLRPLPDKHHGLTDLE
TRYRQRYLDLISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKPFITHHNALDVDMYLRIAPELYL
KRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMIEYYQAYADYHDLMDNTEELLRQLALDILGTTDVPYGDYVFDFGKPF
ERITMHDAIVKYGNGIQREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVAEHQLIQPTFLMAHPAEISPLARRN
DENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEAMFKDEDFIVALEHGLPPTAGEGLGIDRLVM
IFANAPSIRDVILFPAMRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-149 62
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 4e-86 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D650_13710 YP_007666148.1 Lysyl-tRNA synthetase VFG1668 Protein 2e-149 62