Gene Information

Name : D650_13100 (D650_13100)
Accession : YP_007666087.1
Strain : Mannheimia haemolytica USDA-ARS-USMARC-183
Genome accession: NC_020833
Putative virulence/resistance : Unknown
Product : Phage capsid scaffolding
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1268872 - 1269699 bp
Length : 828 bp
Strand : -
Note : Phage capsid scaffolding of root UniRef RepID=B0UTP7_HAES2

DNA sequence :
ATGACAACAAAATCCAAATGGTTTGTGGTAGCAACGGAAGGAGCAACTACAGATGGACGCGAAATTAGTCGTGAATGGCT
CACGCAGATTGAAGAAAATTACGACCCGAAAAATAACTATGGTGCTCGTATTAACCTTGAGCATTTCCGCTGGCGTTGGT
TTGAGAAAGATGACCCGCATTCTTACAGCTATGGCGATGTGTTAGCGGTTAAAACAGAAGAACGTGAAGACGGCAAATTA
CAGTTACTGGCAGAAATCGCCCCAACCGAAGCCTTAGTGAAGTTAGTCAAAGACAAGCAGAAAGTTTATACCTCTGTGGA
AATTGACCTTAATTTTGCGGACACAGGCGAGGCGTATTTAGTTGGTTTGGCGGTGACTGATACACCGGCAAGCCTCGGCA
CGGAATACCTCACATTTTGTGCCGGTGCAACCCATAACCCACTAGCAGACCGCAAGCAAAAGCCGGAAAACCTTGTGAGT
GAGGCAGTAGAGGCGAATTTAGAATTTACTGCTGAACCTGAAAAAGGTGCGTGGCTGGAGAAATTTAAGGCGATGTTTAC
CAAAGCCAAAACCGACAATGACGGCAAATTTGCCGAACACGAAAAGGCAATGGAACTGTTAGCTGAGCAATTTAGCAAAG
TTTCGACAGAAAACGACCGCTTGCAAACTGAACTAAGCACATTGCAAATCGAATTTACCGAATTGCAAAAACAAGCGGGC
GAATTTGCCGAAAAATTTGCAAAACTGGAACAAGAACCGTCTGCCAATTACACCCCACGCCCAAAAGCCACTGGTGCGAA
AGCAGGTGATGTACAAACCGATTTTTAA

Protein sequence :
MTTKSKWFVVATEGATTDGREISREWLTQIEENYDPKNNYGARINLEHFRWRWFEKDDPHSYSYGDVLAVKTEEREDGKL
QLLAEIAPTEALVKLVKDKQKVYTSVEIDLNFADTGEAYLVGLAVTDTPASLGTEYLTFCAGATHNPLADRKQKPENLVS
EAVEANLEFTAEPEKGAWLEKFKAMFTKAKTDNDGKFAEHEKAMELLAEQFSKVSTENDRLQTELSTLQIEFTELQKQAG
EFAEKFAKLEQEPSANYTPRPKATGAKAGDVQTDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 3e-41 45
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 2e-45 44
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 2e-45 44