|
Name : lysS (I653_00410) Accession : YP_007660861.1 Strain : subtilis subtilis BAB-1 Genome accession: NC_020832 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 88653 - 90152 bp Length : 1500 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGTCAAGAAGAGCATAACCATGAAGAATTGAATGATCAGCTGCAAGTCAGACGCGATAAAATGAATCAGCTGAGAGA TAACGGCATCGATCCATTCGGCGCACGTTTTGAAAGAACTCATCAGTCTCAAGAAGTTATTTCGGCATATCAAGATCTAA CCAAAGAAGAGTTAGAAGAAAAAGCGATTGAAGTTACAATCGCAGGCCGCATGATGACAAAACGCGGAAAAGGAAAAGCC GGCTTTGCCCATCTTCAGGATTTAGAAGGCCAAATCCAAATCTACGTAAGAAAAGACAGTGTCGGTGACGACCAATATGA AATCTTCAAGTCTTCTGACCTCGGTGATCTTATCGGTGTAACCGGAAAAGTCTTCAAAACAAATGTAGGCGAATTGTCTG TTAAAGCAACTTCCTTTGAATTGCTGACAAAAGCGCTTCGTCCGCTTCCTGACAAATACCATGGTTTAAAAGACGTTGAG CAGCGCTACCGTCAGCGTTACCTGGATCTTATCGTAAACCCAGACAGCAAACATACATTCATTACACGAAGCAAGATCAT TCAAGCTATGAGAAGATACCTTGATGATCATGGATACTTAGAAGTAGAAACACCTACAATGCACAGCATTCCTGGGGGAG CTTCTGCACGTCCGTTTATCACTCACCACAACGCGTTAGACATTCCACTCTATATGCGTATTGCTATCGAACTGCACCTA AAACGCCTAATTGTCGGCGGTTTAGAAAAAGTATATGAAATCGGCCGTGTTTTCCGTAACGAAGGTGTCTCAACACGTCA TAACCCTGAATTTACAATGATTGAGTTATATGAAGCATATGCGGACTATAAAGATATCATGAGCTTAACTGAAAACCTTG TCGCTCATATCGCCCAAGAAGTGCTTGGCACAACTACGATTCAATACGGGGAAGAGCAAATCGACCTTAAACCGGAGTGG AAAAGAATCCATATGGTTGACGCAGTCAAAGAAGCGACCGGCGTTGATTTCTGGGAAGAGGTTACTGTTGAGCAGGCGCG TGAATATGCAAAAGAACATGGTGTAGAAATTAAAGATTCTATGACAGTAGGGCATATCATCAACGAATTCTTCGAACAAA AAATTGAAGAAACGCTTATTCAGCCAACGTTTATTTACGGGCATCCTGTAGAAATTTCTCCTCTTGCTAAGAAAAACCCT GAGGACCCGCGTTTTACAGACCGTTTTGAGCTGTTTATCGTTGGCCGTGAACATGCCAACGCGTTTACAGAGCTGAATGA TCCTATTGATCAAAGAGAACGCTTTGAAGCGCAATTAAAAGAGCGTGAAGCCGGTAATGATGAAGCTCATCTAATGGATG AAGACTTTGTTGAAGCTCTGGAATACGGTATGCCGCCAACAGGAGGTTTAGGCATCGGTATCGACCGTCTGGTTATGCTG CTGACGAATGCCCCTTCTATTCGCGATGTGCTGTTATTCCCGCAAATGAGACAACGCTAA Protein sequence : MSQEEHNHEELNDQLQVRRDKMNQLRDNGIDPFGARFERTHQSQEVISAYQDLTKEELEEKAIEVTIAGRMMTKRGKGKA GFAHLQDLEGQIQIYVRKDSVGDDQYEIFKSSDLGDLIGVTGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVE QRYRQRYLDLIVNPDSKHTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDIPLYMRIAIELHL KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGTTTIQYGEEQIDLKPEW KRIHMVDAVKEATGVDFWEEVTVEQAREYAKEHGVEIKDSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNP EDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREAGNDEAHLMDEDFVEALEYGMPPTGGLGIGIDRLVML LTNAPSIRDVLLFPQMRQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-126 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007660861.1 | lysyl-tRNA ligase | VFG1668 | Protein | 6e-127 | 53 |
