Gene Information

Name : I653_02620 (I653_02620)
Accession : YP_007661297.1
Strain : subtilis subtilis BAB-1
Genome accession: NC_020832
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 555978 - 557285 bp
Length : 1308 bp
Strand : +
Note : COG1055 Na+/H+ antiporter NhaD and related arsenite permeases

DNA sequence :
TTGACATCAATGATTTTGGCAGTATTCATCTTTTTATTAACTCTAGTATTGGTCATATGGCAGCCCAAAAATTTATCTAT
AGGGTGGTCAGCCTGTGGAGGCGCAGTTTTAGCTCTAATAGCAGGTGTTGTCAATTTTCATGATGTGTTAACTGTGACAG
GGATTGTTTGGAATGCGACCTTGGCTTTTGTGGCCATCATACTGATATCGTTAATTCTTGATAATATCGGTTTCTTTGAA
TGGGCAGCGCTTCATATGGCGAAGGCTGCAAAAGGAAACGGTGTGCGGATGTTCGTTTATGTATCTCTATTAGGAGCTAT
TGTCGCCGCGTTATTTGCAAATGACGGTGCAGCTCTTATATTGACACCAATCGTATTAGCGATGGTCAGAGCATTACATT
TTAATGAAAAATTAGTTTTTCCTTTTATCATTGCCAGCGGATTTATTGCGGATACCACTTCGCTTCCTTTAGTAGTGAGC
AATTTGGTCAACATTGTTTCAGCGGACTATTTTCATATTACGTTTATTGATTATGCATCCAGAATGGTTGTCCCGTACTT
GTTTTCGCTGCTGGCGAGCATCATTGTACTTTACCTTTTCTTTAGAAAAAGCATACCAAAACGCTATGATCTGACTGAGG
TTAAAAAACCTGTTGAAGCAATTAAAGATCAAAACATGTTCAGACTGTCATGGTATATCTTAGGGCTGCTGTTAATTGGA
TATTTTGCAAGTGAATTTTTTTCTATCCCTGTATCAGTGGTAGCGGGTAGCATTGCGGTCATTTTCTTAATCGCTGCGCA
AAAGAGTCCGGCCGTCCATACAAAGAAAGTGGTGAAAGAGGCGCCATGGGCTATCGTATTCTTTTCAATTGGCATGTATG
TTGTTGTGTATGGTGTCCGAAATGCTGGATTGACAGATGTCCTTTCAGATGTGATTCAAGCCGCAGCTGATCAAGGATTG
TTTGCAGGTACGATTGGAATGGGCTTTATCGCGGCAATTCTTTCTTCCATTATGAATAACCTGCCGACTGTCATGATTGA
TGCACTGGCTATTGCCGGTACAGATACACATGGGATGATGAGAGAAGCGCTCATATATGCAAATGTCATCGGTTCAGATT
TAGGACCTAAAATAACACCGATTGGTTCCTTGGCGACATTATTATGGCTTCATGTTCTTTCGCACAAAGGTATGAAAATT
TCCTGGGGCACGTATTTTAAAACAGGAATTATCCTCACGATACCCACTTTATTGATCACACTTGTCGGCCTGTATATTTG
GCTGCTGATAATCCATTCTTGTTTCTAA

Protein sequence :
MTSMILAVFIFLLTLVLVIWQPKNLSIGWSACGGAVLALIAGVVNFHDVLTVTGIVWNATLAFVAIILISLILDNIGFFE
WAALHMAKAAKGNGVRMFVYVSLLGAIVAALFANDGAALILTPIVLAMVRALHFNEKLVFPFIIASGFIADTTSLPLVVS
NLVNIVSADYFHITFIDYASRMVVPYLFSLLASIIVLYLFFRKSIPKRYDLTEVKKPVEAIKDQNMFRLSWYILGLLLIG
YFASEFFSIPVSVVAGSIAVIFLIAAQKSPAVHTKKVVKEAPWAIVFFSIGMYVVVYGVRNAGLTDVLSDVIQAAADQGL
FAGTIGMGFIAAILSSIMNNLPTVMIDALAIAGTDTHGMMREALIYANVIGSDLGPKITPIGSLATLLWLHVLSHKGMKI
SWGTYFKTGIILTIPTLLITLVGLYIWLLIIHSCF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-128 69
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 1e-124 68
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-130 68
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 1e-108 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I653_02620 YP_007661297.1 arsenical pump membrane protein BAC0575 Protein 1e-130 69
I653_02620 YP_007661297.1 arsenical pump membrane protein BAC0574 Protein 9e-127 69
I653_02620 YP_007661297.1 arsenical pump membrane protein BAC0576 Protein 3e-107 60
I653_02620 YP_007661297.1 arsenical pump membrane protein BAC0031 Protein 4e-104 60
I653_02620 YP_007661297.1 arsenical pump membrane protein BAC0578 Protein 2e-106 60
I653_02620 YP_007661297.1 arsenical pump membrane protein BAC0577 Protein 5e-105 58