Gene Information

Name : argF (PalTV_258)
Accession : YP_007660735.1
Strain : Candidatus Portiera aleyrodidarum TV
Genome accession: NC_020831
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 234744 - 235757 bp
Length : 1014 bp
Strand : -
Note : -

DNA sequence :
ATGAATTTACGTAATAGGAATCTTTTAAGTTTAATAAATCATACAAAAGAAGAAATTAATTATTTAATAAACTTAGCAAG
TTATTTAAAAAAGTCAAAATATATAGGAAATGAATATCCTAGATTAAAAGGTAAAAATATAGCATTGATTTTTGAAAAAT
CATCAACTAGAACACGTTGTGCTTTTCAAATAGCAGCTAATGATCAAGGTGCTAATGTAACTTATATTGATTCTAAATCT
TCACAAATGGGATATAAAGAATCTATTAAAGATACAGCAAAAGTATTAGGTCGTATGTTTGACGCAATACAATATAGAGG
ATATAGTCAAAAAATAATAGAAGAATTAGCCAAACATTCAGGTATTCCTGTTTTTAATGGATTAACAAATGAATTTCATC
CAACACAAGTTTTAGCTGATGTATTAACTATGTTAGAACACAGTAATAAATCATTAAATAATATCAAATATGCTTATTTA
GGTGATGCACGTTATAATATTGGAAGATCATTATTATTAATAGGAGCAAAAATGGGTATGGATATACGTATAGCTGCTCC
TAAAAAATTGTGGCCAGAAGAAAAGTTTTTTATATTATGTAATAATATAGCCAAAAAAAATAATGCAAAAATACTTTTAG
TAGAAGATCCTTATATAGCTGTAAAAAATGTAGATTTTATATATACTGATGTTTGGGTATCAATGGGAGAAAGTGAAGAG
GTATGGTGTGACAGAATTAAAAGTCTTTCAAAATATCAAATAAATAAAGAAATTATAAAAGCTACTAATAATTATAAAGT
AAAAGTAATGCATTGTTTACCATCCTTTCATAATAATGAAACATTAATTATAAAAAACTTATTAAAAAATGATTTTATAA
AAAATAAAAAAAAATTAGTTAATGGTTTTGAAATTACTGATGAAATTTTTGAATCATCATATAATATATCTTTTGATCAA
GTTGAAAATAGAATACATACAATAAAATCAATTATGGTAGCAACCTTAAGTTAA

Protein sequence :
MNLRNRNLLSLINHTKEEINYLINLASYLKKSKYIGNEYPRLKGKNIALIFEKSSTRTRCAFQIAANDQGANVTYIDSKS
SQMGYKESIKDTAKVLGRMFDAIQYRGYSQKIIEELAKHSGIPVFNGLTNEFHPTQVLADVLTMLEHSNKSLNNIKYAYL
GDARYNIGRSLLLIGAKMGMDIRIAAPKKLWPEEKFFILCNNIAKKNNAKILLVEDPYIAVKNVDFIYTDVWVSMGESEE
VWCDRIKSLSKYQINKEIIKATNNYKVKVMHCLPSFHNNETLIIKNLLKNDFIKNKKKLVNGFEITDEIFESSYNISFDQ
VENRIHTIKSIMVATLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 5e-71 53
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-71 52
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-72 52
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 9e-72 52
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-71 52
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-71 52
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-71 51