Gene Information

Name : dnaB (PalTV_160)
Accession : YP_007660658.1
Strain : Candidatus Portiera aleyrodidarum TV
Genome accession: NC_020831
Putative virulence/resistance : Unknown
Product : primary replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 149155 - 150513 bp
Length : 1359 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAAATAATTAATGATAAAGATATAAAAAAATTAAAAATACCTCCTCATTCATTAGAAGCAGAACAATCAATATT
AGGTGGTTTAATGCTTGATAACGAAGCGTGGAATAAAATATCAGAAATTATTATAAATGAAGATTTTTATAGTATAGAAC
ATAAATATATTTTTGATGCTATTAAAGATATAGCAGAAAAAAATAATATAATAGATATAGTAACTGTGGCTGAATCGTTA
GAAAAAAACAATAAGTTAGAAAAAATTGGTGGTATAAGTTATTTATCAGAATTATCTAGAAATACTCCGTCAATAAATAA
TATTGTGGCATATGCTGATATAGTTAGAGAACGTGCAATTTTGCGTAATTTAATAAGTATAGCAAATAAAATAGCAGAAG
AAGCTTTTAATAGAAAGGGTAATAATGTGCAAGAAATAATAAATAAAGCTGAAAAATTAATATTTAAAATATCAGAATCA
CGATATAGAGTTAAAAATATATTAAATATAAATGAATTATTAAATAGAACAATTGATCGTATAAATAAAATGTATAGTAC
AAAAAGTTCTATGACTGGATTAATTACAGGATTTACTGAATTAGATAAAATGACATCGGGTTTTCAAAAATCTGATTTAA
TAATAATAGCTGGTAGACCATCTATGGGCAAGACGAGTTTTGCAATGAATATTGTAGAATCTATTATTCTAAATAATAAT
GAGGATCCAGTAATAATATTTTCTATGGAAATGCCTGCAGAACAATTAATATTGCGAATGTTATCTTCATTAGGACGTAT
AGATCAAAATAATATAAGAAAAGGTAATATAGGAGAAGAGGATTGGTTAAAATTAACGGAATCATTAAAATTAATTAAGA
ATTGTAAATTATATGTAGATGATACACCAATGCTTACCCCAATAGAAATAAGAAAAAAAATAAGAAGATGTATAAGAGAT
ACAGGAAAAATCAGTTTAATAATGATAGATTACTTACAATTAATGCATGTTTCTGGAATATCATATAATCGTACGGCAGA
AATTTCGGAAATTTCTAGATCTTTAAAAAGTATAGCTAAAGAATTTAATTGTCCTGTATTAGCTGTATCCCAATTAAATA
GATCGTTAGAACAACGTATTAATAAAAGGCCAATAATTTCCGATTTAAGAGAATCAGGTGCTATAGAACAAGATGCAGAT
TTAATTTTATTTATTTATAGAGACGAAGTATATAATAGTGATAGTTTAGATAATAAAGGTTTAGCTGAGTTAATAATAGG
AAAACAAAGAAATGGTCCAATAGGGGTTATAAATATTAGATTTATAGGAAAATTTACTAAATTTGAAAATTTAAAATAA

Protein sequence :
MKKIINDKDIKKLKIPPHSLEAEQSILGGLMLDNEAWNKISEIIINEDFYSIEHKYIFDAIKDIAEKNNIIDIVTVAESL
EKNNKLEKIGGISYLSELSRNTPSINNIVAYADIVRERAILRNLISIANKIAEEAFNRKGNNVQEIINKAEKLIFKISES
RYRVKNILNINELLNRTIDRINKMYSTKSSMTGLITGFTELDKMTSGFQKSDLIIIAGRPSMGKTSFAMNIVESIILNNN
EDPVIIFSMEMPAEQLILRMLSSLGRIDQNNIRKGNIGEEDWLKLTESLKLIKNCKLYVDDTPMLTPIEIRKKIRRCIRD
TGKISLIMIDYLQLMHVSGISYNRTAEISEISRSLKSIAKEFNCPVLAVSQLNRSLEQRINKRPIISDLRESGAIEQDAD
LILFIYRDEVYNSDSLDNKGLAELIIGKQRNGPIGVINIRFIGKFTKFENLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 2e-91 49
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 6e-99 49
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 9e-91 47
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-91 47
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-88 46
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-90 45
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 5e-87 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 5e-87 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 8e-67 42