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Name : clpC (MED152_04795) Accession : YP_007670986.1 Strain : Polaribacter sp. MED152 Genome accession: NC_020830 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : - COG ID : - EC number : - Position : 1060086 - 1062650 bp Length : 2565 bp Strand : + Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGACGATAATTTTTCACCAAAAGTTAGAGATGTAATCACTTTTAGTAAAGAAGAGGCTTTAAGATTAGGGCACGAATT TATTGGAACTGAACACCTTTTACTAGGATTAATAAGAAAAGGCGAAGGTAAAGCTATTGAGATATTAACAGCGTTTGATG TTGATTTAACTTTGCTAAGAAAAAAATTAGAACAATTAAACCCTGCAAACCCAACGTTTGTAGAGAGTACAGATAAACCT AGCTTGCGTTTAACAAGACAAGCTGAAAAAGCGTTAAAAACAACTTTTTTAGAGGCTAAGTTATATCAAAGTGATGCTAT AGATACAGCACATTTATTGTTGTGCGTTTTAAGAAACGAAAATGACCCAACAACTAAATTAATTCAGAAATATCATGTAA ACTATGATGAAGCAAAAGCTTTATACAAACAATTACATGTAGACGAAGTTGATGCTGATTTACCAGTAAACCCTATTGCA GAAACACCTTCTGATGATGAATATGCTTCAGAAAAATCGAATCCTTTTGATCAGCCCCAGAAAAGCAAAGCTTCAAAAAA ATCTAAAACTCCAGTTTTAGATAATTTTGGTAGAGATTTAACAGATTTGGCGGAAAATGGGAGGCTAGATCCTGTTGTTG GGCGTCAAAAAGAAATAGAGAGAGTTTCTCAAATTTTAAGTCGTAGAAAGAAAAACAACCCAATGTTAATTGGAGAACCA GGTGTTGGTAAATCTGCTATTGCAGAAGGTTTAGCTTTACGAATTGTAGATAGAAAAGTATCAAGAATTTTATTTGATAA GAGAATAGTATCTCTAGATTTAGCTAGTTTAGTTGCTGGAACAAAGTACAGAGGTCAGTTTGAAGAAAGAATGAAAGCCT TAATGAACGAATTAGAAAAGAATGATGATATTATTCTTTTTATTGATGAAATTCATACAATAGTTGGTGCAGGTGGTGCT ACAGGTTCTTTAGATGCATCTAACATGTTAAAACCAGCTTTAGCAAGAGGTGAAATACAATGTATAGGTGCCACAACTTT AGATGAGTTTAGAACAAATATTGAGAAAGATGGTGCTTTAGAACGTCGTTTTCAAAAAGTAATTGTAGACCCAACCTCTG TTGAAGAAACTATTCAGATTTTACAAAATATAAAAGGGAAATACGAAGAACATCATAATGTAGATTTTACAGACGATGCT ATTGAAGCATGTGTAAAATTAACTAATAGATATATGACTGATAGATATTTACCAGACAAAGCTATTGATGCTTTAGATGA GGCTGGATCTAGAATTCATATTACCAATATCGTTGTTCCGAAACAAGTTTTAGAGTTAGAATCTCAATTAGAAATAATTA GAGATAAGAAAACGAAAGCTGTGAATGGCCAAAAGTACGAAGAGGCTGCTAAGTTGAGAGATGATGAAAAGAATATGGAG GCTGCTTTAAACTCTGCTCAAAAACAGTGGGAAGATGATTCTAAATTAAATAGAGAAATCGTTACCGAAGATAATGTTGC AGAAGTAGTTTCTATGATGACAGGTATTCCTGTGAATAGAGTTGCAGAAGCAGAAAGCCACAGGCTACATGAACTACCTT CTTTAATTAAAGGTAAGGTTATTGGACAAGATGAAGCTGTTACGAAAGTTGTTAAAGCTATTCAAAGAAATAGAGTTGGT TTAAAAGACCCGAACAAACCTATTGGTTCATTTATTTTTTTAGGTCAAACTGGTGTTGGTAAAACACAACTAGCAAAAGT ACTGGCTCGTGAATTATTTGATTCTGATGATTCTTTAATTAGAATTGACATGAGTGAATACATGGAAAAGTTCGCAATTT CACGTTTAATTGGTGCACCTCCAGGTTACGTTGGTTATGAAGAAGGAGGACAATTAACAGAAAAAGTGCGCAGAAAACCT TATTCAGTTATCCTATTAGATGAAATTGAAAAAGCGCATCCAGATGTGTTTAATATGTTATTACAGATTTTAGATGATGG TCATATTACAGATAGTTTAGGTAGAAAAATTGATTTTAGAAATACGATAATTATCATGACATCTAATATTGGTGCTCGTC AATTAAAAGACTTTGGTGGTGGAGTTGGTTTTGGAACTGCTTCTAAAAAAGAACAAGCAGACGCACATGCAAAATCGGTA ATTGAAAGTGCATTGAAAAAATCTTTTGCACCTGAATTTTTAAATAGAATTGATGATGTAATTGTTTTCAACGCTTTAGA AAGAGAAGATATTCATTCAATTATCGACATTGAGTTAGACAAATTATTAAATAGAATCTCTGATTTAGGGTATACTTTAA ATCTAAGCGAAAAAGCTAAAGATTATATAGCAGACAAAGGATTTGATAAAAAGTATGGAGCAAGACCTCTTAAAAGAGCT ATCCAGAAATATATTGAAGATGCTTTGGCTGAAGAAATTGTGAATTCTAAATTAACTGAGGGTGATACAATAGCCATGGA TTTTGATGAAGCTAAAGACGAGCTTACCATTAAAATTAAAAAAGGCAAGAAAAAACCTGAAACAAGAACAGAAAGTGAAT CTTAA Protein sequence : MDDNFSPKVRDVITFSKEEALRLGHEFIGTEHLLLGLIRKGEGKAIEILTAFDVDLTLLRKKLEQLNPANPTFVESTDKP SLRLTRQAEKALKTTFLEAKLYQSDAIDTAHLLLCVLRNENDPTTKLIQKYHVNYDEAKALYKQLHVDEVDADLPVNPIA ETPSDDEYASEKSNPFDQPQKSKASKKSKTPVLDNFGRDLTDLAENGRLDPVVGRQKEIERVSQILSRRKKNNPMLIGEP GVGKSAIAEGLALRIVDRKVSRILFDKRIVSLDLASLVAGTKYRGQFEERMKALMNELEKNDDIILFIDEIHTIVGAGGA TGSLDASNMLKPALARGEIQCIGATTLDEFRTNIEKDGALERRFQKVIVDPTSVEETIQILQNIKGKYEEHHNVDFTDDA IEACVKLTNRYMTDRYLPDKAIDALDEAGSRIHITNIVVPKQVLELESQLEIIRDKKTKAVNGQKYEEAAKLRDDEKNME AALNSAQKQWEDDSKLNREIVTEDNVAEVVSMMTGIPVNRVAEAESHRLHELPSLIKGKVIGQDEAVTKVVKAIQRNRVG LKDPNKPIGSFIFLGQTGVGKTQLAKVLARELFDSDDSLIRIDMSEYMEKFAISRLIGAPPGYVGYEEGGQLTEKVRRKP YSVILLDEIEKAHPDVFNMLLQILDDGHITDSLGRKIDFRNTIIIMTSNIGARQLKDFGGGVGFGTASKKEQADAHAKSV IESALKKSFAPEFLNRIDDVIVFNALEREDIHSIIDIELDKLLNRISDLGYTLNLSEKAKDYIADKGFDKKYGARPLKRA IQKYIEDALAEEIVNSKLTEGDTIAMDFDEAKDELTIKIKKGKKKPETRTESES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-179 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007670986.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 48 |
| clpC | YP_007670986.1 | ATP-dependent Clp protease | VFG0080 | Protein | 2e-156 | 48 |
