Gene Information

Name : vanX (MED152_03330)
Accession : YP_007670702.1
Strain : Polaribacter sp. MED152
Genome accession: NC_020830
Putative virulence/resistance : Resistance
Product : D-ala-D-ala dipeptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 713405 - 714013 bp
Length : 609 bp
Strand : +
Note : D-alanyl-D-alanine dipeptidase

DNA sequence : 
ATGGCAAAAGGATTTGTTTATCTTTCAGATATAGCACCAACTATTCAAATGGAATTGCGCTATAACTCAAAAAATAACTT
TATTGGCACACCTATAGATGGTTATAAAAACAATTGTGTAATTCTTACCAAACAAACAGCTTTTGCTTTAGAAAGAGTGC
AATCAGAATTGATTAAAAAAGGTTTAAGCCTCAAAATTTTTGATGCGTATAGACCACAAAAAGCAGTAGATCATTTTGTG
AAATGGGCTAAGGTTTTGAATGATACTTTAATGAAGAAAGAATATTATCCTAATGTACCAAAATCAGAATTATTTCAGAT
AGGCTATATAGCTTCAAAATCTGGACATACAAGAGGAAGTACAGTAGATTTAACAATTATAGATCTTAAAACAGGAAAAG
AATTAGACATGGGTAGTCCTTATGATTTTTTTGGAGTACAATCTCATCCTTTCTACAATGATATATCTAAAGAACAGAAA
GAAAACAGAATGCTTCTACGTAGAGTGATGATGGCTCAAAAATTTATTCCCTATAAAAATGAATGGTGGCATTTTACATT
AAGCAATGAACCCTTTAGAAATCAATATTTTAATTTTAATATTGAATAG

Protein sequence : 
MAKGFVYLSDIAPTIQMELRYNSKNNFIGTPIDGYKNNCVILTKQTAFALERVQSELIKKGLSLKIFDAYRPQKAVDHFV
KWAKVLNDTLMKKEYYPNVPKSELFQIGYIASKSGHTRGSTVDLTIIDLKTGKELDMGSPYDFFGVQSHPFYNDISKEQK
ENRMLLRRVMMAQKFIPYKNEWWHFTLSNEPFRNQYFNFNIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 6e-41 42
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 5e-41 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vanX YP_007670702.1 D-ala-D-ala dipeptidase AF130997.1.orf5.gene Protein 6e-41 43
vanX YP_007670702.1 D-ala-D-ala dipeptidase U35369.1.gene7.p01 Protein 7e-42 42
vanX YP_007670702.1 D-ala-D-ala dipeptidase AE016830.1.gene2249. Protein 2e-41 42
vanX YP_007670702.1 D-ala-D-ala dipeptidase U82965.2.orf32.gene. Protein 7e-40 42
vanX YP_007670702.1 D-ala-D-ala dipeptidase FJ349556.1.orf5.gene Protein 5e-37 41
vanX YP_007670702.1 D-ala-D-ala dipeptidase AF310956.2.orf6.gene Protein 1e-41 41
vanX YP_007670702.1 D-ala-D-ala dipeptidase AF155139.2.orf6.gene Protein 1e-36 41