Gene Information

Name : MED152_02780 (MED152_02780)
Accession : YP_007670594.1
Strain : Polaribacter sp. MED152
Genome accession: NC_020830
Putative virulence/resistance : Virulence
Product : DNA binding helix-turn helix protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 591336 - 591536 bp
Length : 201 bp
Strand : -
Note : -

DNA sequence :
ATGAAGAATACATTAAAAGTACAACGTGCTATTTTAAATCTTACACAAGACGATTTAGCGAAACAAATTGGTGTTTCTAG
ACAAACCATAAATTCTATCGAAAAAAATAGATATGTGCCCAGTACAGTTTTGGCTTTAAAACTGTCTAAAGTCTTTAATA
TAACTGTCAATGAATTCTTTACATTAGAAGAGGATGATTAA

Protein sequence :
MKNTLKVQRAILNLTQDDLAKQIGVSRQTINSIEKNRYVPSTVLALKLSKVFNITVNEFFTLEEDD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-09 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 3e-06 42
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 5e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MED152_02780 YP_007670594.1 DNA binding helix-turn helix protein VFG2168 Protein 1e-06 42
MED152_02780 YP_007670594.1 DNA binding helix-turn helix protein VFG2175 Protein 1e-06 42