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Name : clpB (MED152_01840) Accession : YP_007670406.1 Strain : Polaribacter sp. MED152 Genome accession: NC_020830 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : - COG ID : - EC number : - Position : 392991 - 395597 bp Length : 2607 bp Strand : - Note : ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGAATTTTAATAATTATACAACAAAATCACAAGAGACCATTCAAATGGCGCAACAAATTGCGCAAGGTTATGGTCATAA TCAAATAGAAAATGAGCATATTTTTAAAGCCTTAATTCAGGTAGATGAAAATGTATTACCTTTTCTATTGAAGAAATTGA ATATTAATATTGGCTTAATTACACAAATTTTAGATAAGCAATTAGAGAGTTTACCTAAAGTTTCAGGAGCAGAATTAATG TTATCCAGAGAAGCTGGAACTAGTTTAAATGAAGCATCAATCATTGCTAAAAATATGAAAGATGATTATGTTTCTATAGA ACACTTAATTTTAGCAATTTTTAAGTCTAAAAGTAAAATTGCCCAGGTTTTAAAAGACCAAGGAGTTCATGAAAAAGATT TAAAAGCAGCCATTGAAGAGTTAAGAAAAGGAGATAATGTGACTTCGCAAAACCAAGAAGAAACTTACAATTCTTTAAAT AAATATGCTAAAAATTTGAATCAACTTGCCCAAGAGAACAAGTTAGATCCTGTTATTGGTAGAGATGAAGAAATTAGAAG ACTTCTTCAAATTTTATCTCGAAGAACTAAGAATAACCCGATTTTAGTTGGTGAACCAGGTACTGGTAAAACAGCTATTG CAGAAGGTTTAGCTCATAGAATTGTAGATGGTGATGTACCAGAAAACCTAAAAGATAAATTAATTTTTTCTTTAGATATG GGTGCATTAATTGCTGGTGCAAAATACAAAGGTGAATTTGAAGAGCGTTTAAAAGCAGTAATCAAAGAGGTTACTACTTC TGAAGGTGACATTGTTTTATTCATTGATGAAATTCATACTTTAGTTGGTGCTGGAGGTGGACAAGGTGCAATGGATGCCG CAAATATTTTAAAACCAGCTTTAGCTAGAGGAGAATTGCGTGCAATAGGTGCAACTACTTTAGATGAATATCAAAAATAT TTTGAAAAAGACAAAGCCTTAGAACGTAGATTTCAAAAAGTACAGGTAAATGAGCCAGATACAGAAAGCGCTATTTCTAT TCTTAGAGGAATTAAAGAAAAGTACGAAACACACCATAAAGTTCGTATTAAAGATGAAGCCATTATTGGTGCTGTAGAAT TATCTCAAAGATATATTACCAACCGTTTTTTACCAGATAAAGCCATAGATTTAATGGATGAGGCTGCATCAAAATTACGA ATGGAAATCAACTCTAAACCAGAAGAATTAGATGTATTAGATAGAAAAGTAATGCAGTTAGAGATAGAGATTGAAGCCAT TAAACGTGAAAAAGACGAAGTAAAATTAAATTCTTTACGTTCGGATTTAGCTAATTTAAAAGAAGAACGTAATGAAATTA ATGCAAAATGGAAGTCGGAAAAAGAGGTTGTAGATAATATTCAAAATACTAAGGCCGCTATTGAAGATTTTAAATCTGAA GCTGAAAAAGCAGAACGTGAAGGAGATTATGGAAAAGTTGCTGAAATTAGATATGGTAAAATTAAAAAAGCGCAAGAAGA TTTAGAAGCTTATCAAAAGGTTTTGCAAGAAAATCAGAATGAAAAATCTTTGATTAAAGAAGAAGTGACTTTAGATGATA TTGCAGAGGTTGTAGCAAAATGGACAGGAATTCCTGTTACAAAAATGATACAATCTGAACGCGAAAAGCTTTTGAAATTA GAAGATCAATTACATAAAAGAGTTGTTGGCCAAGAAGAAGCAATTGTGGCCATTTCTGATGCAGTAAGAAGATCTAAAGC AGGCCTACAAAACCCTAACAAACCTATAGGAAGTTTCTTATTCTTGGGTACAACAGGAGTTGGTAAAACTGAGTTAGCAA AAGCTTTAGCTGAATATCTTTTTGATGATGAAAATGCGATGACAAGAATAGATATGAGCGAGTATCAAGAGCGTCATTCT GTGAGTAGATTAGTTGGTGCACCTCCTGGTTATGTTGGTTATGATGAAGGAGGACAATTAACTGAGGCTGTTCGAAGAAA ACCATACTCTGTAGTGCTTTTAGATGAAATTGAAAAAGCACATCCAGACACTTTTAATGTACTTCTTCAAGTTTTAGACG AAGGTAGATTAACAGATAATAAAGGTAGAGTTGCAGATTTTAAAAATGCAATAATTATTATGACATCAAATATGGGTAGC CATATTATACAAGAAAAATTCTCTGATCCTAAAGCAGATTTAGATGCTGTAACTGAATTGGCTAAAATTGAAGTTTTAGG TTTATTAAAGAAGTCTGTAAGACCTGAATTTTTAAACAGAATAGATGATGTTATTATGTTCACACCTTTAAATAAAGTTG ATATATTTGAAATTGTAAAATTACAAATAGATCAATTAAAGAAGATGATTGGTAAGCAAGAAATTACTTTAGACGCTACA GATGAAGCGATTACATATTTAGCTCAAAAAGGATTTCAACCAGAATTTGGTGCTAGACCTGTAAAAAGAGTTATTCAGAA AGAAGTGTTGAATCAACTTTCTAAAGAAATTTTGGCAGGTAGAATTACAACAGATAGTATTATTTTATTAGATGCTTTTG ATGATAAATTAGTTTTTAGAAATCAATCTGATTTAGTTGAAAATTAA Protein sequence : MNFNNYTTKSQETIQMAQQIAQGYGHNQIENEHIFKALIQVDENVLPFLLKKLNINIGLITQILDKQLESLPKVSGAELM LSREAGTSLNEASIIAKNMKDDYVSIEHLILAIFKSKSKIAQVLKDQGVHEKDLKAAIEELRKGDNVTSQNQEETYNSLN KYAKNLNQLAQENKLDPVIGRDEEIRRLLQILSRRTKNNPILVGEPGTGKTAIAEGLAHRIVDGDVPENLKDKLIFSLDM GALIAGAKYKGEFEERLKAVIKEVTTSEGDIVLFIDEIHTLVGAGGGQGAMDAANILKPALARGELRAIGATTLDEYQKY FEKDKALERRFQKVQVNEPDTESAISILRGIKEKYETHHKVRIKDEAIIGAVELSQRYITNRFLPDKAIDLMDEAASKLR MEINSKPEELDVLDRKVMQLEIEIEAIKREKDEVKLNSLRSDLANLKEERNEINAKWKSEKEVVDNIQNTKAAIEDFKSE AEKAEREGDYGKVAEIRYGKIKKAQEDLEAYQKVLQENQNEKSLIKEEVTLDDIAEVVAKWTGIPVTKMIQSEREKLLKL EDQLHKRVVGQEEAIVAISDAVRRSKAGLQNPNKPIGSFLFLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHS VSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDTFNVLLQVLDEGRLTDNKGRVADFKNAIIIMTSNMGS HIIQEKFSDPKADLDAVTELAKIEVLGLLKKSVRPEFLNRIDDVIMFTPLNKVDIFEIVKLQIDQLKKMIGKQEITLDAT DEAITYLAQKGFQPEFGARPVKRVIQKEVLNQLSKEILAGRITTDSIILLDAFDDKLVFRNQSDLVEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-103 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-103 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_007670406.1 | ATP-dependent Clp protease | VFG2076 | Protein | 5e-128 | 44 |
| clpB | YP_007670406.1 | ATP-dependent Clp protease | VFG2084 | Protein | 5e-112 | 41 |
