Gene Information

Name : smpB (MED152_01825)
Accession : YP_007670403.1
Strain : Polaribacter sp. MED152
Genome accession: NC_020830
Putative virulence/resistance : Unknown
Product : SmpB protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 391062 - 391523 bp
Length : 462 bp
Strand : -
Note : tmRNA-binding protein

DNA sequence :
TTGCAGAAAAAAATAAACATTCAGAATAAAAAAGCACGTTTCGAATTTGAAATTTTAGACAAATATGTTGCTGGAATTCA
ATTAACTGGAACAGAAATTAAATCAATAAGACAAAGTCAGGCCAGAATTACTGAAAGTTTTTGTGAATTTAATGAACGTG
GAGAATTGTTTATTGTAAATATGTATATCAAAGAATATATGTATGGTAATCACTTTAATCACAAACCAAAAAGCGAAAGA
CGTTTACTTTTAAACAAGCGTGAATTAAAAAGTTTAAAAAAGGATGTTGAAGCTAAAGGAAATACAATAGTACCCTTAAA
ACTGTTTATAAATGATAGAGGGTTTGCAAAGCTAGAAATAGCACTTGCAAAAGGTAAACAAACCCATGATAAGCGAAATG
TTATTAAAGATAGAGATAACAAAAGAGATTTAGCAAGAATTAAGAAAAGCTTCAATGCTTAG

Protein sequence :
MQKKINIQNKKARFEFEILDKYVAGIQLTGTEIKSIRQSQARITESFCEFNERGELFIVNMYIKEYMYGNHFNHKPKSER
RLLLNKRELKSLKKDVEAKGNTIVPLKLFINDRGFAKLEIALAKGKQTHDKRNVIKDRDNKRDLARIKKSFNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 4e-16 44
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 5e-15 42