Gene Information

Name : MED152_12769 (MED152_12769)
Accession : YP_007672516.1
Strain : Polaribacter sp. MED152
Genome accession: NC_020830
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2812974 - 2814416 bp
Length : 1443 bp
Strand : +
Note : NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGCAAATACAGAACTACATCAATGGCGAATTTGTAAATCCAATTTCAGATAGTTGGTTAGATAACTATAACCCAGCAAA
TGGTGAGGTTTATGGGAAAATTCCAAACTCGGATATCGCTGATGTAGAAAAAGCAATTGAAGCAGCTGAGCTCGCTTTTA
AGAAATGGTCTAAAACTACCTTAGAAGAAAGAGGTCAGATATTATTAAAAATCTCAGAACTTATTTTAGCTAATCTGCAA
TCATTGGCAGAAGCAGAATCTAAAGATAATGGTAAGCCAGTTTCTTTGGCCAAAGAAGTAGATATACCAAGAGCTGCAAG
TAATTTTAAATATTTTGCAAATTCCATTACTCAATTTTCATCAGAAGCTCACGAAAGTATAGGTCATAATGCAGTAAATT
TTACGCTTAGAGAACCTTTAGGAGTGGTAGGTTGTATTTCTCCTTGGAATTTACCTCTCTATCTTTTTACATGGAAAATA
GCACCAGCAATTGCAACAGGTAATTGTGTAATTGCAAAACCAAGTGAGGTTACTCCTGCAACAGCTTTTTTATTGGCAGG
AATTTGCAAGGAAGCAGGTTTGCCAAAAGGAGTTTTAAATATCATTCATGGTTTAGGTTCTACCACAGGTCAAGCAATTG
TTGCTCACCAAAAAATAAAGGCCATTTCATTTACAGGTGGCACCAAAACAGGAGCACATATTGCTAGAGTTGCTGCACCA
ATGTTTAAAAAATTATCTTTAGAATTGGGTGGTAAGAATCCTAATGTCATTTTTGCAGATTGCGACTATGATAAAATGTT
AGCAACTACAGTTCGTTCTTCATTTGCAAATCAAGGTCAAATATGTTTGTGTGGCAGTCGAATATTTGTGGAGCATAAAA
TTTACGAACAGTTTAAAACAGATTTTATTCAGAAAGTATCAGAATTAAAAGTCGGTCATCCCTCTAAAGAAGAAACACAA
ATAGGTGCCTTAGTATCGCAACAACATTTAGAAAAAGTAAAATCTTATATTGATATTGCTGAAAAAGAAGGGGGTAAAAT
ACTTTATGGAGGAAATAAGGTTGAGGTTGCTAATTTCGAAAACGGATACTATTTACAACCAACCATTATTGAGGTTAATA
GTAACCTATGCAAATTAAATCAAGAAGAAATATTTGGGCCAGTTGTAACAATTATGCCTTTTAAAACTGATAAACAAGCT
ATAGAGCTAGCAAATGATACAAAATATGGATTATCAGCTACCTTATGGACGAACAATTTAAACAGAACCATGCAATTTTC
GAAACAATTAAAAACAGGAATTGTTTGGGTTAATACATGGATGTTACGTGATTTAAGAACGCCTTTTGGTGGTCAAAAAG
AAAGTGGAGTAGGCAGAGAAGGAGGTTTTGAAGCACTTCGATTTTTTACAGAACAAAAAAACGTTTGTATTAAATATGAC
TAG

Protein sequence :
MQIQNYINGEFVNPISDSWLDNYNPANGEVYGKIPNSDIADVEKAIEAAELAFKKWSKTTLEERGQILLKISELILANLQ
SLAEAESKDNGKPVSLAKEVDIPRAASNFKYFANSITQFSSEAHESIGHNAVNFTLREPLGVVGCISPWNLPLYLFTWKI
APAIATGNCVIAKPSEVTPATAFLLAGICKEAGLPKGVLNIIHGLGSTTGQAIVAHQKIKAISFTGGTKTGAHIARVAAP
MFKKLSLELGGKNPNVIFADCDYDKMLATTVRSSFANQGQICLCGSRIFVEHKIYEQFKTDFIQKVSELKVGHPSKEETQ
IGALVSQQHLEKVKSYIDIAEKEGGKILYGGNKVEVANFENGYYLQPTIIEVNSNLCKLNQEEIFGPVVTIMPFKTDKQA
IELANDTKYGLSATLWTNNLNRTMQFSKQLKTGIVWVNTWMLRDLRTPFGGQKESGVGREGGFEALRFFTEQKNVCIKYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 4e-89 41
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-78 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-80 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-80 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-80 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-80 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MED152_12769 YP_007672516.1 aldehyde dehydrogenase family protein VFG0082 Protein 2e-78 41