Gene Information

Name : MED152_07705 (MED152_07705)
Accession : YP_007671545.1
Strain : Polaribacter sp. MED152
Genome accession: NC_020830
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism PLP-dependent enzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1732184 - 1733332 bp
Length : 1149 bp
Strand : -
Note : Cystathionine beta-lyases/cystathionine gamma- synthases

DNA sequence : 
ATGAAATTCAATACCAAAACAATTCACGGAGGTCAAATGCATGAAGAAACAACAGGTTCAGTAATGCCACCCGTTTTTTT
AACATCTACCTTTGCACAATCTAGCCCAGGTGAACATAAAGGTTATGCCTATGCAAGAGGAACAAACCCAACCAGAACCG
CTTTAGAAGCTAGTTTTGCAGCTCTTGAAAATGGTACACATGCCTTTGCATTTGCGTCTGGAATGGCTGCTATAGATGCA
GTTTTACGCTTATTAAAACCGGGTGATGAAATTATTGCAGGAGATGATTTATATGGTGGTACGTATAGAATGTTTACCCA
ACTTTTTCAGAAATATGGGTTGGAGTTTACTTATGTAGATATGAACTCTATTGAAAATGTAACCTATGCAATTACTGCTA
ACACAAAGTTGATTTGGATAGAAACACCAACGAATCCTTTAATGAAAATTGCAGATATAGAAGAAATATCAACGAAAGTA
AAAGATGAAAATTCAGAAATTTTAGTAGCTGTAGACAATACCTTTGCTACACCCTATTTACAAAAACCTTTAGATTTAGG
TGCAGATATTGTAATGCATTCTGCTACAAAATATTTAGGTGGTCATTCAGATTTGGTAATGGGCGCTTTAATGGTTAACA
ACGAAAAACTGGCTAAAGAAATTCATTTTATTCAATTTGCAGCAGGTGCAATTGCTGGGCCTATGGACTCATTTTTAGCG
TTAAGAGGGGTAAAAACATTGCATGTAAGAATGCAAAGACATTGTGAAAATGGGTTGAAGGTGGCTAAATTTTTAGATGC
ACATTCAAAAGTAGGCAAGGTTTATTATCCAGGTTTAGAAACCCATGAAAGTTATGCAATTGCTAAGAAGCAAATGAACG
ACTTTGGAGGAATGGTTTCTTTTAAATTAAAAGACGAATCTCAAAAAGCAACATTTGCATTTTTAGAAAGCACAAAGTTA
TTTACGCTGGCAGAATCTTTAGGAGGTGTAGAAAGTTTGGTAAATCATCCTGTAACCATGTCTCATGGTTCTATACCAGA
GAAAGAACGTTTAAAAATAGGTATTACAGATTCCTTAATTCGCTTAAGTGTTGGTATAGAAGATATTGATGATTTGCTTA
ACGATTTAGAGCAGGCATTAAATGCTTAA

Protein sequence : 
MKFNTKTIHGGQMHEETTGSVMPPVFLTSTFAQSSPGEHKGYAYARGTNPTRTALEASFAALENGTHAFAFASGMAAIDA
VLRLLKPGDEIIAGDDLYGGTYRMFTQLFQKYGLEFTYVDMNSIENVTYAITANTKLIWIETPTNPLMKIADIEEISTKV
KDENSEILVAVDNTFATPYLQKPLDLGADIVMHSATKYLGGHSDLVMGALMVNNEKLAKEIHFIQFAAGAIAGPMDSFLA
LRGVKTLHVRMQRHCENGLKVAKFLDAHSKVGKVYYPGLETHESYAIAKKQMNDFGGMVSFKLKDESQKATFAFLESTKL
FTLAESLGGVESLVNHPVTMSHGSIPEKERLKIGITDSLIRLSVGIEDIDDLLNDLEQALNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-80 47
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-79 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-59 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MED152_07705 YP_007671545.1 Cys/Met metabolism PLP-dependent enzyme BAC0207 Protein 6e-68 41