Gene Information

Name : MED152_00705 (MED152_00705)
Accession : YP_007670187.1
Strain : Polaribacter sp. MED152
Genome accession: NC_020830
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 170736 - 171209 bp
Length : 474 bp
Strand : -
Note : -

DNA sequence :
ATGAAAATTAAACTTTTAGCGATAGGAAAAACAGATAATAAACAATTATCATTATTGATAGATGAGTATCAAAACCGTTT
AAAACACTATATAAAGTTTGAGTTAGATATTATACCAGACATTAAAAATGTTAAAAATTTAAGCGAACTTCAGCAGAAAG
AAAAAGAGGGCGAACAAATTTTAAAGAAACTACAAAATACAGATGTTTTGGTTTTGTTAGATGATAAAGGAAAGCATTTT
ACTTCTATCGAGTTTTCTAAATATTTACAAAAAAAGATGAATGCTGGTTTGAAACAGTTGGTTTTAGTTATTGGTGGTCC
TTATGGTTTTTCTGATGCTGTATACCAAAAAGCACAAGGTAAAATATCGCTTTCTAAAATGACGTTTTCTCACCAAATGA
TTCGTCTTTTTATCGTTGAACAATTGTATAGAGGTTTCACCATTTTAAAGAATGAACCCTATCATCATGAGTAG

Protein sequence :
MKIKLLAIGKTDNKQLSLLIDEYQNRLKHYIKFELDIIPDIKNVKNLSELQQKEKEGEQILKKLQNTDVLVLLDDKGKHF
TSIEFSKYLQKKMNAGLKQLVLVIGGPYGFSDAVYQKAQGKISLSKMTFSHQMIRLFIVEQLYRGFTILKNEPYHHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0023 NP_763578.1 rRNA large subunit methyltransferase Not tested SCCpbp4 Protein 2e-26 42
SERP2529 YP_190070.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-26 42
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 2e-25 41
orfX YP_251938.1 rRNA large subunit methyltransferase Not tested SCCmec Protein 8e-26 41
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 2e-25 41
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 2e-25 41
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 2e-25 41
orfX AAL26648.1 unknown Not tested SCCcap1 Protein 1e-24 41
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 2e-25 41
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 2e-25 41
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 2e-25 41
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 2e-25 41
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 2e-25 41
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-25 41
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 2e-25 41
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 2e-25 41