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Name : lysS (MED152_06385) Accession : YP_007671294.1 Strain : Polaribacter sp. MED152 Genome accession: NC_020830 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1443536 - 1445233 bp Length : 1698 bp Strand : + Note : Lysyl-tRNA synthetase (class II) DNA sequence : ATGCAATTATCAGAACAAGAAGTTGTACGTAGAGAAAAGCTCGCAAAATTAAGAGAAATGGGTATAAATCCTTACCCAGC AGATTTATTTCCAATAGATTCTAATTCTAAAGAAATAAAAAGTGATTTTGCAGAAGACAAAAAAGTTGTTATTGCTGGTA GATTAATGTCTAGAAGAATACAAGGTAAAGCATCTTTTGCTGAGCTTCAAGATGGAGAAGGTAGAATACAAGTATATTTT AATCGTGATGAAATCTGTACAGGTGAAGACAAAACTTTATATAATGATGTTTATAAAAAATTACTAGATATTGGTGATTT TATTGGTATAGAAGGTACTTTGTTTACCACAAAAGTGGGTGAAAAAACAGTTATGGTTAAAGATTTCAAATTGTTATCTA AAGCCTTAAAGCCATTGCCATTACCAAAAGTTGATGCAGAAGGTAATACTTATGACGCATTTAACGATCCTGAAATGCGT TACAGACAACGTTATGCAGATTTAGTGGTGAACCCGAATGTAAAAGAGGTATTTATTAAAAGAACTAAATTGTTTAATGC AATGCGATCATTTTTTAATGACGCTGGTTATTTTGAAGTAGAAACACCTGTTTTACAACCAATTCCTGGTGGTGCAGCTG CAAGACCTTTTATTACCCATCACAATTCGCTAGACATTCCATTATACATGAGAATTGCGAATGAATTATACCTAAAACGT ATAATTGTAGGTGGATTTGATGGTGTTTATGAGTTTTCTAAAAACTTCAGAAATGAGGGTATGGACAGAACTCACAATCC TGAATTTACAGCCATGGAAATCTATGTTTCTTACAAAGATTACAATTGGATGATGGATTTCTGTGAGCAATTATTAGAGC ATTGTGCAATTGCAGTTAATGGAACATCAAAAGCAACTTTTGGTGAGCATAATATCGATTTTAAAGCACCTTATGCTAGA GTAACTATGGCAGACTCTATCAAACATTTTACTGGTTTTGATATTACTGGTAAAACAGAAGATGAAATTAGAGAGGCTGC TAAAGGCATGAATATTGAGGTTGATGAAACCATGGGTAAAGGAAAATTGATTGATGAAATTTTTGGTGAAAAATGTGAAG GAAACTACATTCAGCCAACCTTCATTACAGATTATCCAAAAGAAATGTCTCCACTTTGTAAAGAACACAGAGATAACCCA GAATTAACAGAACGTTTTGAGTTAATGGTTTGTGGTAAAGAAATAGCGAATGCATATTCTGAGTTGAATGACCCTATTGA CCAACGTGAGCGTTTTGAGCATCAATTAAAATTGGCTGCTAAAGGAGATGATGAAGCAACAGAGTTTATAGACCATGACT TTTTACGAGCGTTAGAATATGGTATGCCACCAACTTCTGGAATGGGAATTGGAATGGACAGATTAATTATGTTTTTAACG AACAACCAATCTATACAAGAAGTGTTATTTTTCCCTCAGATGAGACCAGAAAAGAAAGCACCTTCTGTAGAATTGAATGA TGAAGAAAAAGCTGTTTTAGCCATAATTACCAAAGCTGAAAAAATTGAGCTAGTTACTTTAAAAACCCAGTCTGGTTTAT CTAATAAAAAATGGGATAAAACCATTAAAGGCTTAACTAAAAAAGAAGTTGCAAAAGTTTCAAAAACAGATGAAGGCTTA TTTGTTGAGGCTTTATAA Protein sequence : MQLSEQEVVRREKLAKLREMGINPYPADLFPIDSNSKEIKSDFAEDKKVVIAGRLMSRRIQGKASFAELQDGEGRIQVYF NRDEICTGEDKTLYNDVYKKLLDIGDFIGIEGTLFTTKVGEKTVMVKDFKLLSKALKPLPLPKVDAEGNTYDAFNDPEMR YRQRYADLVVNPNVKEVFIKRTKLFNAMRSFFNDAGYFEVETPVLQPIPGGAAARPFITHHNSLDIPLYMRIANELYLKR IIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVSYKDYNWMMDFCEQLLEHCAIAVNGTSKATFGEHNIDFKAPYAR VTMADSIKHFTGFDITGKTEDEIREAAKGMNIEVDETMGKGKLIDEIFGEKCEGNYIQPTFITDYPKEMSPLCKEHRDNP ELTERFELMVCGKEIANAYSELNDPIDQRERFEHQLKLAAKGDDEATEFIDHDFLRALEYGMPPTSGMGIGMDRLIMFLT NNQSIQEVLFFPQMRPEKKAPSVELNDEEKAVLAIITKAEKIELVTLKTQSGLSNKKWDKTIKGLTKKEVAKVSKTDEGL FVEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-94 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007671294.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 1e-94 | 44 |
