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Name : H681_04935 (H681_04935) Accession : YP_007656407.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Virulence Product : type 4 fimbrial biogenesis protein PilB Function : - COG functional category : - COG ID : - EC number : - Position : 1073445 - 1074986 bp Length : 1542 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGGAGTTGGCCGCCGACCAGTTCGGTGTCGCCTTCTGCGATCTGAGTAGCCTGGACCGCGAGAGCTTTCCCAAGGAGCT GGTCAGCGAGAAACTCGTTCGCCAGCACCGAGTCCTCCCCTTGTGGCGGAGAGGTAATAAGCTCTTTGTTGGACTGTCAG ACCCTACCAACCATCAGGCAATCACCGACATCCAATTCAGCACCGGACTGACCACCGAAGCCATCCTGGTCGAAGACGAC CGGCTCGGCGATGCCATCGAAAAGCTCTTCGAGAGCGTTACCGGCGGATTGGATGACCTGGGCGACGTCGATCTGGAAGG CTTGGATATCGAGAGCGGCAATGCCGAGCGCAAGGAGGAAGCCATCGGCGGCGACGCCGACGACGCCCCGGTGGTGCGCT TCGTGAACAAGATGCTGCTGGATGCCATCAAGGGCGGCTCGTCCGACCTGCACTTCGAGCCCTACGAGAAGATCTACCGC GTTCGCTTCCGCACCGACGGCATGCTCCAGGAAGTCGCCAAGCCGCCGGTCCAACTGGTCAGCCGCATCTCCGCCCGCCT CAAGGTCATGGCTGGCCTGGATATCTCCGAGCGCCGCAAGCCCCAGGACGGTCGGATCAAGATGCGCGTATCCAAGACCA AGTCCATCGACTTCCGCGTCAATACCCTGCCCACGCTGTGGGGCGAAAAGATCGTGATGCGTATCCTCGACTCGGCCAGT GCGCAAATGGGCATCGACGCTCTGGGCTATGAGGAAGAGCAGAAGCAGCTTTATCTTTCGGCACTCAAGCAGCCGCAGGG CATGATCCTGGTGACCGGCCCCACCGGCTCGGGCAAGACAGTATCCCTGTATACCGGCCTGAATATCCTCAACACCCCGG ACATCAACATCTCGACCGCGGAAGACCCGGTGGAGATCAACCTGGAAGGCATCAACCAGGTCAACGTCAACCCGAAGACA GGCCTGGACTTCGCCCAGGCACTGCGTGCCTTCCTGCGCCAGGACCCTGACGTGATCATGGTGGGCGAGATCCGCGACCT CGAGACCGCAGAAATCGCCATCAAGGCAGCCCAGACCGGGCACATGGTGATGTCCACCCTGCACACCAACAGCGCCGCGG AAACCCTCACCCGCCTGCTGAACATGGGCGTGGCTTCCTTCAACCTCGCCACCTCCACCAACCTGATCATTGCCCAGCGC CTGGCCAGAAAACTGTGCCCGGCCTGCAAGAAGGAGCACGACGTTCCACGCGAAACGCTGCTCCATGAAGGCTTCCCGGA AGCCAGGATCGGTTCGTTCAAGCTCTACGCCCCGGTCGGGTGCGAAAACTGCAAGAACGGTTACAAGGGGCGTGTAGGTA TTTATGAAGTGGTTAAAATCACGCCGGCGCTACAGCGGATTATCATGGAAGAAGGCAATTCCATTCAGATCGCCGAACAA GCCCGCAAAGAAGGCTTCAACGATCTGCGCACCTCGGGCCTGCTGAAAGCCATGCAGGGAATTACCAGCCTCGAGGAAAT CAACCGCGTGACCAAGGATTAA Protein sequence : MELAADQFGVAFCDLSSLDRESFPKELVSEKLVRQHRVLPLWRRGNKLFVGLSDPTNHQAITDIQFSTGLTTEAILVEDD RLGDAIEKLFESVTGGLDDLGDVDLEGLDIESGNAERKEEAIGGDADDAPVVRFVNKMLLDAIKGGSSDLHFEPYEKIYR VRFRTDGMLQEVAKPPVQLVSRISARLKVMAGLDISERRKPQDGRIKMRVSKTKSIDFRVNTLPTLWGEKIVMRILDSAS AQMGIDALGYEEEQKQLYLSALKQPQGMILVTGPTGSGKTVSLYTGLNILNTPDINISTAEDPVEINLEGINQVNVNPKT GLDFAQALRAFLRQDPDVIMVGEIRDLETAEIAIKAAQTGHMVMSTLHTNSAAETLTRLLNMGVASFNLATSTNLIIAQR LARKLCPACKKEHDVPRETLLHEGFPEARIGSFKLYAPVGCENCKNGYKGRVGIYEVVKITPALQRIIMEEGNSIQIAEQ ARKEGFNDLRTSGLLKAMQGITSLEEINRVTKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-83 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-83 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H681_04935 | YP_007656407.1 | type 4 fimbrial biogenesis protein PilB | VFG0112 | Protein | 0.0 | 88 |
| H681_04935 | YP_007656407.1 | type 4 fimbrial biogenesis protein PilB | VFG1880 | Protein | 2e-144 | 57 |
| H681_04935 | YP_007656407.1 | type 4 fimbrial biogenesis protein PilB | VFG0233 | Protein | 2e-120 | 53 |
| H681_04935 | YP_007656407.1 | type 4 fimbrial biogenesis protein PilB | VFG2426 | Protein | 2e-94 | 51 |
| H681_04935 | YP_007656407.1 | type 4 fimbrial biogenesis protein PilB | VFG1876 | Protein | 2e-79 | 48 |
| H681_04935 | YP_007656407.1 | type 4 fimbrial biogenesis protein PilB | VFG0182 | Protein | 1e-83 | 46 |
| H681_04935 | YP_007656407.1 | type 4 fimbrial biogenesis protein PilB | VFG2048 | Protein | 8e-85 | 46 |
