Gene Information

Name : H681_04740 (H681_04740)
Accession : YP_007656368.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : two-component response regulator PilR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1030095 - 1031435 bp
Length : 1341 bp
Strand : -
Note : COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

DNA sequence : 
ATGAGTCGTCAAAAAGCCCTGATCGTCGATGACGAACCCGATATCCGCGAGCTGCTGGAGATCACCCTCGGTCGCATGAA
GCTCGATACCCGCAGCGCCCGCAACGTCAAGGAAGCGCGTGAGCTCCTGGCCCGCGAGCCGTTCGACTTCTGCCTCACCG
ACATGCGCCTGCCCGACGGTACCGGCCTGGATCTGGTGCAGTACATCCAGCAGCGCCATCCGCAGACACCGGTGGCGATG
ATCACCGCGTTCGGCAGCCTGGACACCGCGGTCCAGGCGCTAAAAGCCGGCGCCTTCGACTTTCTCACCAAGCCCGTCGA
CCTCGCGCGCCTGCGCGAACTGGTCGGCACGGCGCTGCGCCTGCGCTTCCCCGATGCCGAGGAAGCCCCGGTGGACAACC
GCCTGCTCGGCGACTCGCCGCCGATGCGCCAGATGCGCAACCAGATCGCCAAGCTGGCGCGCAGCCAGGCACCGGTCTAC
ATCAGCGGCGAATCGGGCAGCGGCAAGGAACTGGTCGCCCGACTGATCCATGAACAGGGTCCGCGCGCGAATATCGCCTT
CGTCCCGGTGAACTGCGGGGCGATTCCGTCAGAGCTGATGGAAAGCGAGTTCTTCGGCCACAGGAAAGGCAGCTTCACCG
GCGCGGTAGAGGACAAGCTGGGACTGTTCCAGGCCGCCAACGGCGGCACCCTCTTCCTCGACGAGGTCGCCGACCTGCCG
CTGCCCATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAAGCCGTGCGCGCCGTCGGCGGCCAGCAGGAAAACGCGGT
GGACGTACGCATCCTCTGCGCGACCCACAAGGATCTCGCCACGGAAGTCTCCGCCGGCCGCTTCCGCCAGGACCTCTACT
ACCGCCTGAATGTCATCGAGCTGCGCGTACCGCCACTGCGCGAGCGCCGCGAAGACATTCCGCTGCTCACCGACCGCGTG
CTCAAGCGCCTGGCCGGCGATGTCGGACTGCCCGTGGCGACGGTCAGTTCCGATGCCGTGGAGAAGCTCAAGAGCTACCG
TTTCCCCGGCAACGTGCGCGAACTGGAGAACATGCTCGAGCGCGCCTACACGCTGTGCGAGAACGACGTGATCCAGTCCC
ATGACCTGCGCCTGGCCGAGACCACCAGCAGCGGCGACAACGGCGGCCCGGCGAGCCTCGCGCAGATCGACAACCTCGAG
GACTACCTCGAAGACATCGAGCGCAAGCTGATCATGCAAGCCCTGGAGGAAACCCGCTGGAACCGCACCGCGGCTGCGCA
GCGCCTGGGGCTCACCTTCCGCTCGATGCGCTACCGGCTGAAGAAGCTGGGGATCGACTGA

Protein sequence : 
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDFCLTDMRLPDGTGLDLVQYIQQRHPQTPVAM
ITAFGSLDTAVQALKAGAFDFLTKPVDLARLRELVGTALRLRFPDAEEAPVDNRLLGDSPPMRQMRNQIAKLARSQAPVY
ISGESGSGKELVARLIHEQGPRANIAFVPVNCGAIPSELMESEFFGHRKGSFTGAVEDKLGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGQQENAVDVRILCATHKDLATEVSAGRFRQDLYYRLNVIELRVPPLRERREDIPLLTDRV
LKRLAGDVGLPVATVSSDAVEKLKSYRFPGNVRELENMLERAYTLCENDVIQSHDLRLAETTSSGDNGGPASLAQIDNLE
DYLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 8e-99 49
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 8e-99 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_04740 YP_007656368.1 two-component response regulator PilR BAC0467 Protein 3e-70 43
H681_04740 YP_007656368.1 two-component response regulator PilR BAC0089 Protein 7e-70 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_04740 YP_007656368.1 two-component response regulator PilR VFG1214 Protein 0.0 89
H681_04740 YP_007656368.1 two-component response regulator PilR VFG0116 Protein 2e-56 43