Gene Information

Name : H681_04470 (H681_04470)
Accession : YP_007656314.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Unknown
Product : transposase InsF for insertion sequence IS3A/B/C/D/E/fA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 974824 - 975477 bp
Length : 654 bp
Strand : -
Note : COG2801 Transposase and inactivated derivatives

DNA sequence :
ATGTGCCGGCTGCTGCAGGTATCCCGCAGCGGTTTCTATGCCTGGCAGCAGCGGCCTCCCTCGGCGAGAGAGATGGCGAA
TCGGCGTCTGAGCCAGGAGATCCGCACCATCCACCACGAGGTGAATGGGATCTATGGCCATCGCCGAATCAAGGCCGAGT
TGGCGGCCATGGGGCATGCGTGTGGTCGACACCGAGTCGCTCGACTGATGCGCGAAGCCGGCCTGCGTGTTCGTTCGCGC
AAGCGTTGGCGGCTGGTTTCCAGCAGTCGTCATGCTCTGCCGATTGCCCCGAACCACCTGGATCGCCAGTTCGCCTCGGA
TCGCGCCAATCGGCACTGGGTCTCGGACATGACCTACGTGCGGACGGCCCAAGGCTGGCTGTATCTGGCCGTCGTGCTCG
ATCTCTATTCACGCGCTGTCGTCGGTTGGGCGATGCACCACCGCATGCAGCAGGCCCTGGTGCATGCTGCTCTGGAGATG
GCCGTTGCACGCCGACAGCCGAAAGAAGAAGTGCTGCTGCACTCGGATCGTGGCAGCCAATACTGCGCGTACGACTACCA
GGCCTTGCTTCGGCGACATCGAATCGTGCCCAGCCATTCACGTCCGGGGACTGCTGGGACAACGCCGCGATGGAGAGCTT
CTTCCGTTCGCTGA

Protein sequence :
MCRLLQVSRSGFYAWQQRPPSAREMANRRLSQEIRTIHHEVNGIYGHRRIKAELAAMGHACGRHRVARLMREAGLRVRSR
KRWRLVSSSRHALPIAPNHLDRQFASDRANRHWVSDMTYVRTAQGWLYLAVVLDLYSRAVVGWAMHHRMQQALVHAALEM
AVARRQPKEEVLLHSDRGSQYCAYDYQALLRRHRIVPSHSRPGTAGTTPRWRASSVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 9e-42 45
unnamed AAF09030.1 unknown Not tested SHI-O Protein 9e-42 45
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 9e-42 45
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-42 45
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 9e-42 45
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-42 45
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 9e-42 45
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 9e-42 45
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 5e-41 44
unnamed CAC39293.1 hypothetical protein Not tested LPA Protein 1e-34 43
M5005_Spy_0167 YP_281531.1 transposase Not tested Not named Protein 8e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_04470 YP_007656314.1 transposase InsF for insertion sequence IS3A/B/C/D/E/fA VFG1706 Protein 3e-42 45