Gene Information

Name : H681_24330 (H681_24330)
Accession : YP_007660273.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Resistance
Product : two-component response regulator PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5448126 - 5448815 bp
Length : 690 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGGTTGGCAAGACAATCCTCATCGTCGATGACGAAGCTCCGATCCGGGAAATGATCGCCGTGGCCCTGGAGATGGCCGG
CTACGAATGCCTTGAGGCCGACAGCGCCCAGACGGCTCACGCGGTGATCGTCGACCGCAAGCCGGACCTGATCCTGCTCG
ACTGGATGCTGCCGGGCACTTCCGGCATCGAGCTGGCCCGCCGCCTCAAGCGCGACGAGCTGACCTCGAGCATCCCGATC
ATCATGCTCACCGCCAAGGGCGAGGAGGACAACAAGATCCAGGGCCTGGAAGTCGGCGCCGACGATTACATCACCAAGCC
CTTCTCCCCGCGCGAACTGGTGGCTCGCCTGAAGGCCGTGCTGCGGCGCACCGGCGCCGGCGACAGCGAGACACCGATCG
AAGTCGGCGGCCTGATGCTCGACCCCATCAGCCACCGTGTGACCATCGACGGCAAGCCCGCCGAGATGGGGCCGACCGAA
TACCGCCTGCTGCAGTTCTTCATGACCCACCAGGAGCGCGCCTACACCCGTGGCCAGCTGCTGGACCAGGTCTGGGGCGG
CAACGTGTACGTGGAAGAGCGCACCGTCGACGTGCACATCCGCCGCCTGCGCAAGGCCCTGGGCGAGGTCTACGAAAATC
TGGTTCAGACCGTGCGCGGTACCGGTTATCGTTTCTCGACCAAAAACTGA

Protein sequence : 
MVGKTILIVDDEAPIREMIAVALEMAGYECLEADSAQTAHAVIVDRKPDLILLDWMLPGTSGIELARRLKRDELTSSIPI
IMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRRTGAGDSETPIEVGGLMLDPISHRVTIDGKPAEMGPTE
YRLLQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHIRRLRKALGEVYENLVQTVRGTGYRFSTKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 5e-35 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 5e-35 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 5e-35 41
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 5e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_24330 YP_007660273.1 two-component response regulator PhoB HE999704.1.gene2815. Protein 9e-42 44
H681_24330 YP_007660273.1 two-component response regulator PhoB NC_012469.1.7685629. Protein 2e-34 41
H681_24330 YP_007660273.1 two-component response regulator PhoB AE000516.2.gene3505. Protein 3e-31 41