Gene Information

Name : ureC (H681_21795)
Accession : YP_007659766.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.5
Position : 4871857 - 4873557 bp
Length : 1701 bp
Strand : +
Note : COG0804 Urea amidohydrolase (urease) alpha subunit

DNA sequence :
ATGAAGATCAGCAGACAAGCCTACGCCGACATGTTCGGCCCCACCGTCGGCGACCGCGTGCGCCTGGCCGATACCGGCCT
GTGGATCGAGGTGGAGCAGGACTTCACCGTCTACGGCGAGGAAGTGAAGTTCGGCGGCGGCAAGGTCATCCGCGACGGCA
TGGGCCAGAGCCAGCTGTGCGCCGCGCAGGTCGTCGACACGGTGATCACCAACGCGCTGATCCTCGACCACTGGGGCATC
GTCAAGGCCGACGTAGGCCTCAAGCACGGGCGCATCGCCGCCATCGGCAAGGCCGGCAACCCGGACATCCAGCCCGGCGT
GACCATCGCCCTGGGCGCCAGCACCGAAGTGATTGCCGGCGAGGGCATGATCCTCACCGCCGGCGGCATCGACACGCACA
TCCACTTCATCTGTCCGCAGCAGATCGAAGAGGCGCTGATGAGCGGGATCACCACCATGATCGGCGGCGGTACCGGGCCG
GCCACCGGCACCAACGCCACCACCTGCACCTCCGGTCCCTGGCACATGGCGCGCATGCTCCAGGCCGCGGATGCCTTCCC
GATGAACATCGGCTTCACCGGCAAGGGCAACGCCAGCCTGCCGCTGCCGCTGGAAGAGCAGGTGCGCGCCGGCGCCATCG
GCCTGAAGCTGCACGAGGACTGGGGCACCACCCCGGCGGCCATCGACAACTGCCTCTCGGTGGCCGACCGCCTCGACGTG
CAGGTGGCGATCCATACCGACACCCTCAACGAGTCCGGCTTCGTCGAAACCACCCTCGCCGCGTTCAAGGGCCGCACCAT
CCACACCTACCATACCGAGGGCGCCGGTGGCGGCCACGCGCCGGACATCATCAAGGCCTGCGGCTTCGCCAATGTGCTGC
CCAGTTCGACCAACCCGACCCGGCCCTTCACCCGCAACACCATCGACGAACACCTGGACATGCTCATGGTCTGCCACCAC
CTCGACCCGAGCATCGCCGAGGACGTGGCCTTCGCCGAGTCGCGCATCCGCCGCGAGACCATCGCCGCCGAGGATATCCT
CCACGACCTCGGCGCCTTCAGCATGATCAGCTCCGACAGCCAGGCCATGGGCCGCGTCGGCGAAGTGATCACGCGCACCT
GGCAGACCGCCGACAAGATGAAAAAACAGCGCGGCGCACTGGACGGCGACGGCGCGCGCAACGACAACTTCCGCGCCAAG
CGCTACATCGCCAAGTACACCATCAACCCGGCGATCACCCACGGCGTCGCCCATGAAGTGGGCAGCATCGAAGTGGGCAA
GCTGGCCGACCTGGTGCTCTGGCGTCCAGCGTTCTTCGGTGTGAAGCCAAGCCTGATCCTCAAGGGCGGCGCCATCGCCG
CGAGCCTGATGGGCGACGCCAACGCGTCGATTCCGACGCCACAGCCGGTGCACTACCGACCGATGTTCGCAAGCTACGGC
GGCAGCCGCCACGCCACTTGCCTGACCTTTCTCAGCCAGGCCGCGTTCGACCTCGGCGTGCACCACGAACTGGGCCTGCG
CAAGGCCATCGGCGTGGTGAAGGGCTGCCGCAGCGTGCAGAAGACCGACCTGATCCACAACGCCTACCTGCCGCACATCG
AGGTCGACGCGCAGAACTACCAGGTACGCGCCGACGGTCAGTTGCTGTGGTGCGAACCGGCTGACGTGCTGCCGATGGCG
CAGCGGTATTTTCTCTTTTGA

Protein sequence :
MKISRQAYADMFGPTVGDRVRLADTGLWIEVEQDFTVYGEEVKFGGGKVIRDGMGQSQLCAAQVVDTVITNALILDHWGI
VKADVGLKHGRIAAIGKAGNPDIQPGVTIALGASTEVIAGEGMILTAGGIDTHIHFICPQQIEEALMSGITTMIGGGTGP
ATGTNATTCTSGPWHMARMLQAADAFPMNIGFTGKGNASLPLPLEEQVRAGAIGLKLHEDWGTTPAAIDNCLSVADRLDV
QVAIHTDTLNESGFVETTLAAFKGRTIHTYHTEGAGGGHAPDIIKACGFANVLPSSTNPTRPFTRNTIDEHLDMLMVCHH
LDPSIAEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVITRTWQTADKMKKQRGALDGDGARNDNFRAK
RYIAKYTINPAITHGVAHEVGSIEVGKLADLVLWRPAFFGVKPSLILKGGAIAASLMGDANASIPTPQPVHYRPMFASYG
GSRHATCLTFLSQAAFDLGVHHELGLRKAIGVVKGCRSVQKTDLIHNAYLPHIEVDAQNYQVRADGQLLWCEPADVLPMA
QRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 0.0 74
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 0.0 74
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-160 62
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-160 62
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 2e-160 62
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-160 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_007659766.1 urease subunit alpha VFG0270 Protein 1e-155 64