Gene Information

Name : H681_21205 (H681_21205)
Accession : YP_007659648.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4749812 - 4750477 bp
Length : 666 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
TTGGCGGAAGACGACCAGTTGCTGGGCGATGGCATTCGCGCGGGGCTCGGTCTGGAAGGCGACACCGTGGACTGGGTCAA
TGATGGCCTGGCCGCCGATCAGGCGTTGCAGACCGACGAGTTCGACCTGCTGGTGCTCGACCTCGGCCTGCCGCGTAAGG
ACGGCCTGGACGTGTTGCGCAGCCTGCGCCGGCGCGGCGACCTGACGCCGGTGCTGATCCTCACCGCCCGCGACAAGGTG
GCCGACCGCGTGGCTGGCCTCGACGCCGGCGCCGACGACTACCTGACCAAACCCTTCGACCTCGACGAACTGCTCGCCCG
CGTCCGCGCCCTCACCCGCCGCCGCACCGGCCGTGCCGTGCCGCTGCTGCAGCACGGCGAACTGATGCTGGACCCCGCCA
CCCATCAGGTCAACCTCGCCGGTACACCGGTGGACCTGGCCCCGCGCGAGTACGCCCTGCTGCGCCTACTGCTGGAACAA
CGCGGCAAAGTGCTGTCGCGCACCCGCCTGGTGGAGGCCCTGTATGGCTGGGACGGCGACCTGGAGAGCAACGCCATCGA
GGTCCACATCCACCACCTGCGCCGCAAGCTGGGCAACGGCCTGATCCGCACCGTACGCGGCATCGGCTACGGCATCGACC
GGCCCGGCAACCCCTCCCAGCCGTGA

Protein sequence : 
MAEDDQLLGDGIRAGLGLEGDTVDWVNDGLAADQALQTDEFDLLVLDLGLPRKDGLDVLRSLRRRGDLTPVLILTARDKV
ADRVAGLDAGADDYLTKPFDLDELLARVRALTRRRTGRAVPLLQHGELMLDPATHQVNLAGTPVDLAPREYALLRLLLEQ
RGKVLSRTRLVEALYGWDGDLESNAIEVHIHHLRRKLGNGLIRTVRGIGYGIDRPGNPSQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-30 48
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_21205 YP_007659648.1 DNA-binding response regulator BAC0487 Protein 2e-32 47
H681_21205 YP_007659648.1 DNA-binding response regulator NC_002516.2.879194.p Protein 3e-25 44
H681_21205 YP_007659648.1 DNA-binding response regulator BAC0197 Protein 9e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_21205 YP_007659648.1 DNA-binding response regulator VFG0473 Protein 9e-35 47
H681_21205 YP_007659648.1 DNA-binding response regulator VFG1390 Protein 2e-30 44
H681_21205 YP_007659648.1 DNA-binding response regulator VFG1389 Protein 3e-23 43
H681_21205 YP_007659648.1 DNA-binding response regulator VFG0596 Protein 1e-24 41