|
Name : smpB (H681_21180) Accession : YP_007659643.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 4741956 - 4742435 bp Length : 480 bp Strand : + Note : COG0691 tmRNA-binding protein DNA sequence : ATGGCTAAACAGAAAAAACACCCTTCGGGGACCATCGCGCAGAACAAGAAGGCTCTGCACGACTACTTCATCGAGCAGCG CTTCGAGGCGGGCATCGCCCTGGCCGGCTGGGAAGTCAAAAGCCTGCGCGCCGGCAAGGCGCAGCTGGTGGACAGCTACG TGCTGCTCAAGGATGGCGAAGCCTGGCTGCTGGGCAGCCACATCACGCCGCTGACCACCGCCAGCACCCACGTCATCGCC GACCCCGTGCGCACGCGCAAGCTGCTGCTGCACAAACGCGAGCTGGGCAAGCTGTTCGGTGCCGTGCAGCAGAAAGGCTA CGCCTGTGTCGCGCTGTCGATTTACTGGAAGAAGCACCTGATCAAGTGCGAGATCGCACTGGCCAAGGGCAAGAAAGAGT TCGACAAGCGCGACACCGAGAAGGAGCGCGACTCCAACCGGGAAATCCAGCGCGCCATGCGTCACGGCAAGGACGACTGA Protein sequence : MAKQKKHPSGTIAQNKKALHDYFIEQRFEAGIALAGWEVKSLRAGKAQLVDSYVLLKDGEAWLLGSHITPLTTASTHVIA DPVRTRKLLLHKRELGKLFGAVQQKGYACVALSIYWKKHLIKCEIALAKGKKEFDKRDTEKERDSNREIQRAMRHGKDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 4e-35 | 54 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 1e-24 | 46 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 9e-25 | 45 |
