Gene Information

Name : xerD (H681_18645)
Accession : YP_007659136.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4182460 - 4183356 bp
Length : 897 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGATGCCGGTTTCACATTTACTGATCGATCGTTTCCTGGATGCCCTCTGGCTGGAAAAGGGGCTTTCCGACAACACCCG
CAGCGCCTACGGCAGCGACCTGGCGCTGTTCAACGGCTGGCTCGACGAGCGCGGGGTGGCGCTGGAGGCGGCGGGGCGCG
AGGTGATCCTCGACCACCTGGCCTGGCGTCTGGGGGAGGGCTACAAGGCGCGCTCCACCGCGCGCTTCCTCTCGGGGTTG
CGGGGCTTCTACCGCTATTGCCTGCGGGAAGGGCTGATCGACGAGGATCCGACGTTGCTGGTGGAACTGCCACAACTGGG
CAAACCCCTGCCCAAATCGCTCTCGGAGGCCGACGTCGAAGCGTTGCTGGCGGCGCCGGAAACCGACGATCCGCTCGGCC
TGCGCGACCGCACCATGCTGGAGGTGCTCTACGCCTGTGGGCTGCGGGTCAGCGAGCTGGTCGGGCTGACCCTGGAGCAG
GTCAACCTGCGCCAGGGTGTGGTGCGTGTCATGGGCAAGGGCAGCAAGGAACGGCTGGTGCCGCTGGGAGAGGAGGCGAT
CCGCTGGATCGAGCGCTACGTGCGCGAGGCGCGCGCGGACCTGCTGGGCGGCCGCCCCAGCGACGTGCTGTTTCCCAGCC
TGCGCGGCGAACAGATGACCCGGCAGACCTTCTGGCACCGCATCAAGCTGCACGCGAAGGTAGCCGGCATCGGCAAGAGC
CTGTCGCCGCACACCCTGCGCCATGCGTTCGCCACTCATCTGCTCAACCACGGTGCGGACCTGCGGGTGGTACAGATGCT
GCTGGGGCACAGTGACCTGTCCACCACGCAGATCTACACCCACATCGCCCGGGCGCGCCTGCAGGACCTGCACGCACAGC
ATCACCCCCGCGGCTGA

Protein sequence :
MMPVSHLLIDRFLDALWLEKGLSDNTRSAYGSDLALFNGWLDERGVALEAAGREVILDHLAWRLGEGYKARSTARFLSGL
RGFYRYCLREGLIDEDPTLLVELPQLGKPLPKSLSEADVEALLAAPETDDPLGLRDRTMLEVLYACGLRVSELVGLTLEQ
VNLRQGVVRVMGKGSKERLVPLGEEAIRWIERYVREARADLLGGRPSDVLFPSLRGEQMTRQTFWHRIKLHAKVAGIGKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHIARARLQDLHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-63 53
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-63 53