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Name : lysS (H681_18460) Accession : YP_007659099.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 4141363 - 4142865 bp Length : 1503 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGCGACCAACTCGACCCGACCGAACTGCAACAGGAAGAAAACAAGCTGATCGCCCAGCGCAAGGAAAAGCTTGCCGC CGTGCGTGAAGCCAAGGCCATCGCCTTCCCCAACGACTTCCGCCGCGATGCCTACTTCGCGGACCTGCAGAAACAGTACG AAGGCAAGACCAAGGAAGAGCTGGAAGCCGCAGCCATCCCGGTCAAGGTCGCCGGTCGCATCATGCTCAACCGCGGTTCC TTCATCGTCTTGCAGGACAGCAGCGGCCGCCTGCAGGCCTACGTCAACCGCAAGACCCTGCCGGAAGAAACCCTGGCCGA GGTGAAGACCTGGGACCTGGGCGACATCATCGGCGCCGAAGGCGTGCTGGCCCGCTCGGGCAAGGGCGACCTGTACGTCG ACATGAGCAGCGTGCGCCTGCTGACCAAGTCCCTGCGCCCGCTGCCGGACAAGCACCACGGCCTGACCGACACCGAGCAG CGCTATCGCCAGCGCTACGTCGACCTGATCGTCAATGAGGAAACCCGCCACACCTTCCGCGTGCGTTCCCAGGTCATCGC CCATATCCGTCGCTTCCTGTCCGATCGCGGCTTCCTCGAAGTGGAAACCCCGATGCTGCAGACCATCCCCGGCGGCGCGG CGGCCAAGCCCTTCGAGACCCACCACAACGCGCTGGACATGGCCATGTTCCTGCGCATCGCCCCGGAGCTGTACCTCAAG CGCCTGGTGGTCGGTGGCTTCGAGAAGGTCTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTTTCGACCCGGCACAA CCCCGAGTTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTACGAAGACAACATGGACCTGACCGAGGAACTGTTCC GCGAGCTGGCCCAGGCCGTGCTCGGCAGCACCGACGTGCCCTACGGCGACAAGGTCTTCCACTTCGGCGAGCCGTTCGCC CGCCTGTCCGTGTTCGACGCCATCCTCAAGTACAACCCGGAACTCACCGCGGCTGACCTGAACGACGTCGACAAGGCCCG CGAGATCGCCAAGAAGGCCGGCGCCAAGGTCCTCGGCCACGAAGGCCTGGGCAAGCTGCAAGTGATGATTTTCGAGGAGC TGGTCGAGCACAAGCTGGAGCAGCCGCACTTCATCACCCAGTACCCGTTCGAGGTCTCCCCGCTGGCCCGTCGTAACGAC CAGGACCCGAGCGTCACCGACCGCTTCGAGCTGTTCATCGGTGGCCGCGAGATCGCCAACGCCTACTCTGAGCTGAACGA CGCCGAAGACCAGGCCGAGCGCTTCATGCTGCAGGTGAAGGAGAAGGACGCCGGTGACGACGAGGCGATGCACTACGACG CCGACTTCGTCAACGCGCTCGAATACGGCATGCCGCCCACCGCTGGCGAAGGCATCGGCATCGACCGCCTGGTGATGCTG CTGACCAACTCGCCGTCGATCCGCGACGTCATCCTGTTCCCGCACATGCGCCCGCAGGCGTAA Protein sequence : MSDQLDPTELQQEENKLIAQRKEKLAAVREAKAIAFPNDFRRDAYFADLQKQYEGKTKEELEAAAIPVKVAGRIMLNRGS FIVLQDSSGRLQAYVNRKTLPEETLAEVKTWDLGDIIGAEGVLARSGKGDLYVDMSSVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLIVNEETRHTFRVRSQVIAHIRRFLSDRGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVPYGDKVFHFGEPFA RLSVFDAILKYNPELTAADLNDVDKAREIAKKAGAKVLGHEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRND QDPSVTDRFELFIGGREIANAYSELNDAEDQAERFMLQVKEKDAGDDEAMHYDADFVNALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-140 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-81 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007659099.1 | lysyl-tRNA ligase | VFG1668 | Protein | 3e-140 | 59 |
