|
Name : H681_15275 (H681_15275) Accession : YP_007658463.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Unknown Product : IS3 family transposase Function : - COG functional category : - COG ID : - EC number : - Position : 3442493 - 3443338 bp Length : 846 bp Strand : + Note : COG2801 Transposase and inactivated derivatives DNA sequence : GTGGAGTACCCGGTACGGCGTCTCTGCCAGACCCTCAAGGTGCATCCCAGCGGTTACTACGCCTGGCTGGCCGAGCCGAA ATCCGTACGCACCAAGGAAGATCAGCGCCTGCTCGGATTGATCAAGCATGCCTGGCTGGAAAGCGGTGGGGTCTACGGCT ACCGCAAGATCCACGACGACCTGCGTGAACTGGGGGAGTCCTGTGGCCGGCACCGCGTGGCTCGCCTGATGGCGGGGAGA GGGCTGCGCTCGCAGACCGGTTATCGTCGGCGTCCCGGCTATTACGGTGGCAGACCGACGGTGGCCTCGCCCAATCGCCT GGAGCGGCAGTTCAACGTCAGTGAACCGAACAAGGTCTGGGTCACCGACATCACCTACATCCGCACCTATGAGGGTTGGT TGTACTTGGCGGTGGTGCTGGATCTGTTTTCACGCCAGGTGATTGGCTGGTCGATGAAACCACGGATGTGCAGCGACCTG GCCATCGATGCGTTGCTGATGGCGGTGTGGCGGCGCAAGCCCAAGCAGGAAGTGATGATCCACTCCGACCAGGGCAGCCA GTTCAGCAGCTCGGACTGGCAGAGTTTCCTCAAGGCCAACAATCTCATCAGCAGCATGAGTCGACGCGGCAACTGTCACG ACAACGCGGTGGCAGAAAGCTTTTTCCAGTTGCTGAAGCGCGAACGCATCCGACGGAAAACCTACGGCACTCGCGAAGAA GCTCGCAGTGATGTGTTCGATTACATCGAGATGTTTTATAACCCCAAACGCCGGCACAGCAGCGCTATGCAGCTATCGCC AGTGGAGTTTGAAAAGCGCTATTTCCAGAGCTTGGAGAGTGTCTAG Protein sequence : MEYPVRRLCQTLKVHPSGYYAWLAEPKSVRTKEDQRLLGLIKHAWLESGGVYGYRKIHDDLRELGESCGRHRVARLMAGR GLRSQTGYRRRPGYYGGRPTVASPNRLERQFNVSEPNKVWVTDITYIRTYEGWLYLAVVLDLFSRQVIGWSMKPRMCSDL AIDALLMAVWRRKPKQEVMIHSDQGSQFSSSDWQSFLKANNLISSMSRRGNCHDNAVAESFFQLLKRERIRRKTYGTREE ARSDVFDYIEMFYNPKRRHSSAMQLSPVEFEKRYFQSLESV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 4e-38 | 45 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 4e-38 | 45 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 6e-44 | 44 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 3e-43 | 44 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 1e-43 | 44 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 2e-45 | 43 |
| ECO111_3779 | YP_003236114.1 | putative IS602 transposase OrfB | Not tested | LEE | Protein | 8e-33 | 41 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 1e-39 | 41 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 1e-39 | 41 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 1e-39 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H681_15275 | YP_007658463.1 | IS3 family transposase | VFG1631 | Protein | 1e-45 | 43 |
