Gene Information

Name : H681_14985 (H681_14985)
Accession : YP_007658405.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3381888 - 3382544 bp
Length : 657 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGTTTGCTGTTGGTGGAGGATGACCAGGCCCTGGGCGAAGGCGTACGCACCGGCCTGCGCCAGGAGGGCTACACCAT
CGACTGGCTGCAGGATGGCGCCAGCGCACTGCACGCCCTGCGGACCGAAGAGTTCGACCTGGTGGTGCTCGACCTCGGGC
TGCCGCGCCTCGACGGCCTGCACGTACTCGGCCGCGTGCGCGCGGCCGGCTCGACGGTCCCGGTGCTGATCCTCACCGCC
CGCGACGCCACCGAGGATCGCATCGCCGGCCTGGACGCCGGCGCCGACGACTACCTGGTCAAACCCTTCGACCTCCACGA
ACTCCAGGCCCGCCTGCGCGCGCTGCTGCGCCGCAGCAGCGGACGGGCGCGGGCGCTGATCGAGCACGCCGGGGTCAGCC
TCGACCCGTCGACCCAGCAGGTCCGCTTCCAGGGGCAGCCCGTGGTCCTCACCCCCAAGGAATACCAACTGCTGCACGAA
CTGCTGGCGCAGCCGGGCAAGGTCTTCACCCGCGACCGCCTGACCCAGTTGCTCTACGGCTGGGATGAAAGCGCTGAAAG
CAACACCCTGGAAGTCCACATCTCGCACCTGCGCAAGAAGCTGTTCAGCGGCCTGATCCGCACCGTACGGGGCATCGGCT
ACCTGGTGGAAGCCTGA

Protein sequence : 
MRLLLVEDDQALGEGVRTGLRQEGYTIDWLQDGASALHALRTEEFDLVVLDLGLPRLDGLHVLGRVRAAGSTVPVLILTA
RDATEDRIAGLDAGADDYLVKPFDLHELQARLRALLRRSSGRARALIEHAGVSLDPSTQQVRFQGQPVVLTPKEYQLLHE
LLAQPGKVFTRDRLTQLLYGWDESAESNTLEVHISHLRKKLFSGLIRTVRGIGYLVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-34 47
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-28 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_14985 YP_007658405.1 two component transcriptional regulator BAC0487 Protein 9e-36 49
H681_14985 YP_007658405.1 two component transcriptional regulator NC_002516.2.879194.p Protein 2e-28 44
H681_14985 YP_007658405.1 two component transcriptional regulator BAC0197 Protein 1e-31 44
H681_14985 YP_007658405.1 two component transcriptional regulator BAC0308 Protein 3e-28 41
H681_14985 YP_007658405.1 two component transcriptional regulator AE000516.2.gene3505. Protein 2e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_14985 YP_007658405.1 two component transcriptional regulator VFG0473 Protein 4e-39 49
H681_14985 YP_007658405.1 two component transcriptional regulator VFG1390 Protein 6e-33 42
H681_14985 YP_007658405.1 two component transcriptional regulator VFG0596 Protein 3e-28 41