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Name : H681_14910 (H681_14910) Accession : YP_007658390.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Virulence Product : type VI secretion ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 3364387 - 3366936 bp Length : 2550 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGACCTCGCCAGCCTGATCGGCCGCCTCAATCCCGAATCCCGCCGCGCCCTGGAGCGCGCCGCGCAGCGCTGCCTGCA ACGCACCCATCACTACGTCGAGATCGAGCACCTGCTGCTGGAACTGCTGGACATCGACGGCGGCGACCTCGCCCGGCTGC TGCCGCGCTTCGGCCTCGAGCGCGACCAATTGGTGGGCGAGATCAACACCGCGCTGGAGCTGTTCCGCATCGGCAGCACG CGCACCCCGGCACTCTCCACGCAAACCATCGGCCTGCTGGAAGACGCGGTGGTGCAGACCAGCGTGCTCGGCCAGCCGAC GATCCGCTCCGGGCTGCTGCTGCTCGCCCTGCTCGACCGCGAGGAACGCCGCGCCCTGCTGCTCAACAGCGCCTCGTCGC TGCTGCGCATTCCCCACGAAACGCTGCGGGAAAAACTCCTGGAATGGACCGAAGGCTCCCGCGAACAGCCACCCAGCGCA CGCACTCCGGACAAGACGAAACCCGCCAACGCGGCGGCCCAGGACAGCGTGCTCGACCAATACACCCAGGACCTCACCGC CGACGCCCACGCCGGGCGCATCGACCCCATCGTCGGGCGCGACGGCGAGATCCGCCAGTGCGTGGACATCCTCCTGCGCC GCCGGCAGAACAACCCGATCCTCGTCGGTGCGCCCGGCGTCGGCAAGACCGCCGTAGTGGAAGGCCTGGCCCTGCGCATC GCCGCCGGGGAAGTGCCACCTCCGCTGCAAGGCGTGATTCTGCGCGTACTCGACCTCGGCCTGCTGCAGGCCGGCGCCGG GGTCAAGGGCGAGTTCGAGCAGCGCCTGAAAGGCGTGATCGACGCAGTGCGCAGCAGCGAGCAGCCGATCATCCTGTTCA TCGACGAGGCCCACACCCTGATCGGCGCCGGCGGCGCGGAAGGCGGCAGCGATGCCGCCAACCTGCTCAAGCCGGCCCTG GCCCGTGGCGAGCTGCGCACCCTCGCCGCCACCACCTGGCTGGAATACAAGAAGTACTTCGAGAAGGACCCGGCGCTGGC CCGGCGCTTCCAGCTGGTGCAGGTCGAGGAACCGGACGAGGCCACCGCCGTCGACATGCTGCGCGGTGTGGCCGCCAAGC TCGAACAGCACCACGGCGTGCAGGTGCTGGACGTGGCCATCCACGACGCGGTGAAGCTCTCGCACCGCTACATCTCCGGC CGCCAGTTGCCGGACAAGGCCATCAGCGTGCTGGACACCGCCTGTGCCCGCGTCGCCCTGGCCCAGCACGATGTCCCGCC GGCACTGGAAAACCTGCGCCACCGCGAACTGGCGGTGGAAGAAGAGCTGCAACGCCTGCGTCGCGAACAGGCCACCGGCC TGGACCACAGCACGCGCATCACCAGCCTGGAACAGGAATCGGTGGACAACCTCGCCGCCATCCGCGCCCTGGAAAAACGC TGGGGCGAGGAACGCGAGGCGGTGCGCGAGCTGCTGCAATCGCGCCGCGAACTACTGACCCTGAGCGAAAGCGCCGACGC CGCCAAGCCCGACGAGGAACTCGACGGCCGCATCGATCATCTGGCCGCCGAACTGGCGCGCCTGGAAGCCGGCCTCGACG CCATCCGCGAGGACGACCCGCTGGTGCCCGAACAGGTCGACTCGAAGACCGTGGCCGCGGTGATCGCCGGCTGGACCGGC ATCCCGGTGGGCAAGATGCTCGCCGACGAGGCCCACGCCATCCGCACCCTGGCGCAACGCATGAGCCAGCGGGTGATGGG CCAGGAAGCGGCGCTGGGCACCATCGCCCAGCGCATCCAGGCCTACCGCGCCGGCCTCACCGACCCGGCCAAGCCGGTGG GCGTGTTCCTCCTGCTCGGCCCCACCGGCGTGGGCAAGACCGAAACCGCCTACGCCCTGGCCGACGCCCTCTACGGCGGC GAGCGCAACCTCATCAGCATCAACCTTTCCGAGTACCAGGAAGCCCACACCGTCAGCCAGCTCAAGGGCGCCCCGCCCGG CTACGTCGGCTACGGCAGCGGCGGCGTGCTCACCGAGGCCGTGCGCCGCCGGCCCTACTCGGTGGTCCTGCTGGACGAAA TCGAGAAGGCCCACCCCGACGTGCTGGAAGCCTTCTACAACGTCTTCGACAAGGGCGTGATGGAGGACGGCACCGGCCTG GTGGTGGACTTCAAGAACACCGTGATCCTCGCCACCAGCAACGTCGGCGCCGAACTGCTGCTGGACACCCCTTCGGAACA GACCGCTACGCCCACCTTCGACGAACGCCTGCGCAAGGTGCTGCTGCAAGCCTTCCGCGCCGCCTTCCTGGCGCGCATGA CGGTGGTGCCCTACCGGCCGCTGGAGGAAGCGACGCTGGAAGGGATCGTCGTCGCGAAGCTGGAGAAGCTGCGCGAGCGC TACAAGGCGGCTACCGGCAAGCAATTCGACTTCGACCCGGCGATCGTCAAGGCGGTGCTCGCCAAGTGCAGTTCGGCGGG GGCGCGGGATATTGAAAATGTGTTGATGGCGGAGGTGACGGGGAAGTTGGCGGAGTGGGTGCTGGGATAA Protein sequence : MDLASLIGRLNPESRRALERAAQRCLQRTHHYVEIEHLLLELLDIDGGDLARLLPRFGLERDQLVGEINTALELFRIGST RTPALSTQTIGLLEDAVVQTSVLGQPTIRSGLLLLALLDREERRALLLNSASSLLRIPHETLREKLLEWTEGSREQPPSA RTPDKTKPANAAAQDSVLDQYTQDLTADAHAGRIDPIVGRDGEIRQCVDILLRRRQNNPILVGAPGVGKTAVVEGLALRI AAGEVPPPLQGVILRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSSEQPIILFIDEAHTLIGAGGAEGGSDAANLLKPAL ARGELRTLAATTWLEYKKYFEKDPALARRFQLVQVEEPDEATAVDMLRGVAAKLEQHHGVQVLDVAIHDAVKLSHRYISG RQLPDKAISVLDTACARVALAQHDVPPALENLRHRELAVEEELQRLRREQATGLDHSTRITSLEQESVDNLAAIRALEKR WGEEREAVRELLQSRRELLTLSESADAAKPDEELDGRIDHLAAELARLEAGLDAIREDDPLVPEQVDSKTVAAVIAGWTG IPVGKMLADEAHAIRTLAQRMSQRVMGQEAALGTIAQRIQAYRAGLTDPAKPVGVFLLLGPTGVGKTETAYALADALYGG ERNLISINLSEYQEAHTVSQLKGAPPGYVGYGSGGVLTEAVRRRPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDGTGL VVDFKNTVILATSNVGAELLLDTPSEQTATPTFDERLRKVLLQAFRAAFLARMTVVPYRPLEEATLEGIVVAKLEKLRER YKAATGKQFDFDPAIVKAVLAKCSSAGARDIENVLMAEVTGKLAEWVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-130 | 52 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-123 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-123 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H681_14910 | YP_007658390.1 | type VI secretion ATPase | VFG2076 | Protein | 2e-152 | 49 |
| H681_14910 | YP_007658390.1 | type VI secretion ATPase | VFG2084 | Protein | 2e-126 | 46 |
