Gene Information

Name : H681_13835 (H681_13835)
Accession : YP_007658177.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3125514 - 3126194 bp
Length : 681 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCCTGCTGCTGGTGGAAGACCACGTCCCCCTGGCCGATGAACTGCTGGCCGCCCTGACGCGCCAGGGCTATGCCGT
CGACTGGCTGGCCGACGGCCGCGATGCCGCCGTGCAGGGCGCCAGCGAGCCCTATGACCTGATCGTTCTCGACCTCGGCC
TGCCGGGGCGTCCAGGACTGGATGTGCTGCGCGAATGGCGCGGCATGGGGCTGGCAACGCCAGTGCTGATCCTCACCGCG
CGCGGTTCCTGGGCCGAGCGCATCGACGGCTTGAAGGCTGGCGCCGACGACTACCTCACCAAGCCATTCCATCCCGAAGA
GCTACTGCTGCGCATCCAGGCGCTGCTGCGCCGTGCCCGTGGCCTGGCCAACCAGAGCCAGCTGGAGGTGGCGGGGCTGA
GCCTGGACGAGGCGCGGCAGTGCGTGCAGCAGGGCGGCAAGGACGTCGATCTGACTTCCGCCGAGTTCCGCCTGCTGCGC
TACTTCATGCTGCATCCCGGGCAGTTGCTGTCGAAGTCCCACCTCGCGGAGCACCTCTATGACGGCGAGACGGAGCGCGA
CTCCAACGTCATCGAGGTGCATATCAACCACCTGCGCCGCAAGCTGGGCCGCGAGATCATCGAGACCCGCCGTGGGCAGG
GTTACCGCTTCACCGGCAATGCCGGCGGAGCCGCCCGTTGA

Protein sequence : 
MRLLLVEDHVPLADELLAALTRQGYAVDWLADGRDAAVQGASEPYDLIVLDLGLPGRPGLDVLREWRGMGLATPVLILTA
RGSWAERIDGLKAGADDYLTKPFHPEELLLRIQALLRRARGLANQSQLEVAGLSLDEARQCVQQGGKDVDLTSAEFRLLR
YFMLHPGQLLSKSHLAEHLYDGETERDSNVIEVHINHLRRKLGREIIETRRGQGYRFTGNAGGAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_13835 YP_007658177.1 putative two-component response regulator NC_002516.2.879194.p Protein 4e-27 48
H681_13835 YP_007658177.1 putative two-component response regulator BAC0487 Protein 1e-19 43
H681_13835 YP_007658177.1 putative two-component response regulator BAC0083 Protein 1e-22 41
H681_13835 YP_007658177.1 putative two-component response regulator BAC0638 Protein 1e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_13835 YP_007658177.1 putative two-component response regulator VFG0473 Protein 2e-21 42