Gene Information

Name : H681_13575 (H681_13575)
Accession : YP_007658125.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : response regulator GacA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3068288 - 3068932 bp
Length : 645 bp
Strand : -
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
GTGATCAAGGTGCTGGTGGTCGATGACCACGATCTGGTGCGCACCGGAATTACCCGCATGCTGGCCGATATCGACGGCCT
GCAGGTCGTCGGTCAGGCTGACTCTGGCGAGCGTGGGCTGCAACTGGCTCGAGAGCTCAAGCCCGATGTCGTGCTGATGG
ATGTGAAGATGCCCGGTATCGGTGGGCTGGAGGCGACTCGCAAGTTGCTGCGCAGCCAGCCCGATGTGCGCGTGGTGGTG
GTGACCGTGTGCGAGGAAGATCCGTTCCCGACACGGCTGATGCAGGCCGGCGCTGCCGGATACCTCACCAAGGGTGCGGC
GCTCGAGGAAATGGTCCAGGCCATTCGCCAGGTATTTGCCGGCCAACGCTACATCAGCCCGCAGATCGCCCAGAACCTGG
CGCTGAAATCCTTCGAACCCGAGAAAAACGCGTCTCCCTTCGACACGCTGTCCGAGCGGGAAATCCAGATTGCCCTGATG
ATTGCTAATTGCCACAAGGTACAAAGCATCTCGGACAAGCTCTGCCTGTCGCCCAAAACCGTCAACACCTACCGTTACCG
TATCTTCGAGAAGCTCTCGATCACCAGCGACGTGGAACTGGCGCTGCTGGCCGTTCGGCACGGCATGGTCGATACCAACA
ACTGA

Protein sequence :
MIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGERGLQLARELKPDVVLMDVKMPGIGGLEATRKLLRSQPDVRVVV
VTVCEEDPFPTRLMQAGAAGYLTKGAALEEMVQAIRQVFAGQRYISPQIAQNLALKSFEPEKNASPFDTLSEREIQIALM
IANCHKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVRHGMVDTNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-55 56
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-55 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_13575 YP_007658125.1 response regulator GacA VFG1889 Protein 8e-52 52