Gene Information

Name : H681_13340 (H681_13340)
Accession : YP_007658078.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3011020 - 3011787 bp
Length : 768 bp
Strand : +
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGTTCGAACTGGAAAATGTCAGTTTCAGCGTCCCCGGCCGCACGCTCCTGCAACCGCTGAGCCTGCAACTCGCCCACGG
CAGCATGATCGGCCTGATCGGCCACAACGGCTCGGGCAAATCGACCCTGCTCAAGCTGCTGGCCCGCCAGCAGCAGGCCA
GCGGCGGCAGCATCCGCCTGGACGGCAAGCCGCTGCAGGACTGGGGCAACCGCGACTTCGCGCGCCAGGTGGCCTACCTG
CCGCAGCAGTTGCCGCAAACCGACGGCCTGACCGTGCGCGAGCTGGTCGCCTTCGGCCGCTATCCGTGGCACGGCGCGCT
GGGCCGCATCACCGGCGAGGACCGCAAGCAGATCGACCGCGCCCTGGAGCTGACCGACACCCAGGTCTTCGCCGACCGCC
CGGTGGACCTGCTCTCCGGCGGCGAGCGCCAGCGCGTCTGGCTGGCCATGCTGCTGGCGCAGAACAGCCGCTTCCTGCTG
CTGGACGAGCCGACGTCCGCACTGGACATCGCCCACCAGGTGGAAGTGCTCTCCCGCGTCCACGAACTCAGCCGCGAGCT
GGACCTGGGCGTGCTGGTGGTGCTGCACGACATCAACATGGCGGCGCGCTACTGCGACCACCTGATCGCGCTGCACGGCG
GCCGCCTGCTGGCCCAGGGCAGCCCGGCGCAACTGATGCACGGCGAGACGCTGGAAGGTATCTACGGCATTCCTATGGGC
GTGCTGGCCAATCCGGTGGACGGCTCGCCGATCAGTTACCTGCGTTAA

Protein sequence : 
MFELENVSFSVPGRTLLQPLSLQLAHGSMIGLIGHNGSGKSTLLKLLARQQQASGGSIRLDGKPLQDWGNRDFARQVAYL
PQQLPQTDGLTVRELVAFGRYPWHGALGRITGEDRKQIDRALELTDTQVFADRPVDLLSGGERQRVWLAMLLAQNSRFLL
LDEPTSALDIAHQVEVLSRVHELSRELDLGVLVVLHDINMAARYCDHLIALHGGRLLAQGSPAQLMHGETLEGIYGIPMG
VLANPVDGSPISYLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-35 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-35 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-35 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-35 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_13340 YP_007658078.1 ABC transporter-like protein VFG0925 Protein 3e-43 42