Gene Information

Name : H681_13045 (H681_13045)
Accession : YP_007658019.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : Siderophore biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2944190 - 2945176 bp
Length : 987 bp
Strand : -
Note : COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins

DNA sequence :
ATGACGCCCGATTTTTCCCTGCCGCTGCCCGATGGCCGCAAACTCACCGCCGATCACGGCACCCAAAGCCTGGCCCTGCT
GCTGGACGGCCAGCCGCTGCTCAGCGTGCAACGCGAAGGCGAGTGCTGGCAACTGAGTTCCGCGCCGACTGTGGAAGCGC
TGTGGGCGCTGGCTTACTGGACCTTCGCTGGCGATGCGCAGAGCGAGCGCGTGCAGTTCGCCGCCACCCAGGTTCCGCTC
GAGGCATTCGAACAAGGCCTGGTGAGCCGCGATGAAGTCGGCGGGCGCCTGCAGATCGAGCGTGCCGCCTTCTGGCAACT
GGGAACCGCCTGGCACAAGGGCGTGGCCAGCGCCAACTACCCGCAGGTCTACCGCATGAGTGGCGGTCGCCGCCATCCGC
TGCGTGCGCCCAAGCCGCAGGGCGAGGTCTATCGTCGCTTCGACGCCCGGCTGGGCCAGTGGATTTCCCTGCGCACCCTG
GATATCGAGCTGGACCTGGAGCGCTTCAACCGCTGGCAGAACAGCCCGCGCGTGCTGGAGTTCTGGCAGGAAGGCGGCAC
CCGGGAACAGCACCGCGCCTACCTGGAAAAAGCCGCCGCCGACCCACACACCACTACCCTGATCGGCTGCATCGACGACG
AACCCTTCGCCTACTACGAAGCCTACTGGGCCAAGGAAGACCGCATCGCGCCGTTCTACGAGGTGGGCGATTACGACCGC
GGCATCCACATGCTGGTGGGCGAGGACAGCCATCGCGGGCCACACAAGGTGGAAAGCTGGATGACCGCGCTGGTGCACTA
CCTGCTGCTGGACGACCCGCGCACCCAGCGCATCGTCGCCGAGCCGCGCGCCGACAACGCCAGGATGATCGGCCACATGC
AGCGCCTGGGCTTCTGGCGCGAGAAGGACTTCGACTTCCCGCACAAGCGCGCGGCGCTGATGGTGCAGAGCCGGGAAACC
TTCTTCGAGCGTTGCGGCCTGTGCTGA

Protein sequence :
MTPDFSLPLPDGRKLTADHGTQSLALLLDGQPLLSVQREGECWQLSSAPTVEALWALAYWTFAGDAQSERVQFAATQVPL
EAFEQGLVSRDEVGGRLQIERAAFWQLGTAWHKGVASANYPQVYRMSGGRRHPLRAPKPQGEVYRRFDARLGQWISLRTL
DIELDLERFNRWQNSPRVLEFWQEGGTREQHRAYLEKAAADPHTTTLIGCIDDEPFAYYEAYWAKEDRIAPFYEVGDYDR
GIHMLVGEDSHRGPHKVESWMTALVHYLLLDDPRTQRIVAEPRADNARMIGHMQRLGFWREKDFDFPHKRAALMVQSRET
FFERCGLC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 5e-50 49
iucB AAK71632.1 IucB Virulence SHI-3 Protein 4e-50 49
iucB AAD44747.1 IucB Virulence SHI-2 Protein 4e-50 49
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 5e-50 49
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 5e-50 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_13045 YP_007658019.1 Siderophore biosynthesis protein VFG0939 Protein 2e-50 49
H681_13045 YP_007658019.1 Siderophore biosynthesis protein VFG0616 Protein 2e-50 49
H681_13045 YP_007658019.1 Siderophore biosynthesis protein VFG1082 Protein 2e-50 49