Gene Information

Name : H681_01255 (H681_01255)
Accession : YP_007655673.1
Strain : Pseudomonas denitrificans ATCC 13867
Genome accession: NC_020829
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 281629 - 282375 bp
Length : 747 bp
Strand : +
Note : COG3279 Response regulator of the LytR/AlgR family

DNA sequence :
ATGAATGTCCTGATCGTCGATGACGAACCCCTGGCGCGAGAGCGCCTGGCCCGGCTGGTAGGGCAACTGGACGGCTATCG
CGTCCTCGAACCCTCCGCCAGCAATGGTGAAGAAGCGCTGACGCTGATCGACAGCCTGAAGCCGGATATCGTCCTGCTGG
ATATCCGCATGCCCGGCCTGGACGGGCTTCAGGTGGCGGCCAAGCTGTGCGAGCGCGAAACCCCACCGGCGGTGATCTTC
TGCACCGCCCATGACGAATTCGCCCTGGAGGCCTTCCAGGTCAGCGCGGTCGGCTACCTGGTCAAGCCGGTCCGCAGCGA
GGACCTGGCCGAAGCCTTGAAGAAGGCCTCGCGGCCCAACCGCGTGCAACTGGCGGCGTTGACCAAGCCGCCGGCAGCCG
GCGGTCCCGGCCCGCGCAGCCACATCAGCGCGCGGACCCGCAAAGGCATCGAGCTGATCCCGTTGGAAGACGTGATCTTC
TTCATCGCCGACCACAAGTACGTGACCCTGCGCCACGCTGGCGGCGAAGTGCTGCTGGACGAGCCGCTGAAGGCGCTGGA
AGACGAGTTCGGTGATCGCTTCGTGCGTATCCACCGCAACGCGCTGGTTTCCCGCGAGCGCATCGAGCGCTTGCAGCGTA
CGCCGCTGGGGCACTTCCAGCTGTACCTCAAGGGGCTCAACGGCGATGCACTGACCGTCAGCCGCCGGCATGTCGCTGGC
GTACGGCGACTCATGCATAACCTGTAG

Protein sequence :
MNVLIVDDEPLARERLARLVGQLDGYRVLEPSASNGEEALTLIDSLKPDIVLLDIRMPGLDGLQVAAKLCERETPPAVIF
CTAHDEFALEAFQVSAVGYLVKPVRSEDLAEALKKASRPNRVQLAALTKPPAAGGPGPRSHISARTRKGIELIPLEDVIF
FIADHKYVTLRHAGGEVLLDEPLKALEDEFGDRFVRIHRNALVSRERIERLQRTPLGHFQLYLKGLNGDALTVSRRHVAG
VRRLMHNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 4e-52 46
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 4e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
H681_01255 YP_007655673.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 8e-113 96