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Name : H681_10860 (H681_10860) Accession : YP_007657584.1 Strain : Pseudomonas denitrificans ATCC 13867 Genome accession: NC_020829 Putative virulence/resistance : Virulence Product : putative Orn/Arg/Lys decarboxylase Function : - COG functional category : - COG ID : - EC number : - Position : 2375760 - 2378012 bp Length : 2253 bp Strand : + Note : COG1982 Arginine/lysine/ornithine decarboxylases DNA sequence : ATGTATAAAGACTTAAAATTCCCCATTCTCATCGTTCATCGCGACATCAAGGCCGACACCGTGGCCGGCGACCGCGTCCG TGACATCGCCCGCGAGCTGGAGCAGGACGGCTTCAGCATCCTCTCCACCGCCAGTTCCGCCGAGGGGCGCATCGTTGCTT CCACCCACCACGGGCTCGCCTGCATCCTGGTCGCCGCCGAGGGGGCGGGGGAGAACCAGCGGTTGCTGCAGGACGTGGTC GAGCTGATCCGCATGGCGCGGGTGCGCGCGCCGCAGTTGCCGATCTTCGCCCTCGGCGAGCAGATGACCATCGAGAACGC GCCGGCCGAGTCCATGTCCGACCTGCACCAGCTGCGCGGCATCCTCTACCTGTTCGAAGATACCGTGCCCTTCCTCGCCC GCCAGGTCAGCCGCGCCGCGCGCAGGTACCTGGAAGGCCTGCTGCCGCCGTTCTTCCGCGCGCTGGTGGAGCACACCGCG CAGTCCAACTATTCCTGGCACACCCCCGGCCACGGCGGCGGCGTGGCCTATCGCAAGAGTCCGGTGGGGCAGGCGTTCCA CCAGTTCTTCGGGGAAAACACCCTGCGCTCGGACCTCTCGGTTTCGGTGCCGGAACTGGGCTCGCTGCTCGACCACACCG GCCCGCTGGCCGAAGCGGAGGCCCGTGCGGCGCGCAATTTCGGCGCCGACCACACCTTCTTCGTGATCAATGGCACCTCG ACCGCGAACAAGATCGTCTGGCACTCGATGGTCTGCCGCGACGACCTGGTACTGGTGGATCGCAACTGCCACAAGTCGAT CCTGCACGCGATCATCATGACCGGCGCGATTCCGCTCTACCTGACTCCGGAGCGCAACGAGCTGGGCATCATCGGACCGA TTCCGCTCGCCGAGTTCAGCCGCGAATCCATTGCCGCGAAGATCGCCGCCAGCCCGCTGGCGCAGGGGCGTCAACCCAGG GTCAAGCTGGCGGTGGTGACCAACTCCACCTACGACGGCCTCTGCTACAACGCCGAGATGATCAAGCAGGCGTTGGGGGA CAGCGTCGAGGTGCTGCATTTCGACGAAGCCTGGTACGCCTATGCGGCCTTCCACGACTTCTACGACGGGCGCTACGGCA TGGGTACCCGCCGCCAGGACAGCGGCCCGCTGGTGTTCACCACCCATTCCACCCACAAGATGCTCGCCGCCTTCAGCCAG GCCTCGATGATCCACGTGCAGGACGGCGGCGCCCGGCGCTTCGACCGGGCGCGTTTCAACGAAGCCTTCATGATGCACAT CTCCACCTCGCCGCAGTACGGCATCATCGCCTCGCTGGACGTGGCCTCGGCGATGATGGAGGGCCCGGCGGGGCGTTCGC TGATCCAGGAAACCTTCGACGAGGCGCTGAGCTTTCGCCGCGCCCTGGCCAACGTGCAGCAGAATCTCGCCGAGGACGAC TGGTGGTTCTGCGTCTGGCAGCCGCCGGGCGTGGAGGGCACCGACGAGGTCAAGACCTGTGATTGGGTGCTGGAGCCCAA CGCCGACTGGCATGGCTTCGGCGATGCGGTCGAGGATTACGTGCTGCTCGACCCGATCAAGGTCACCCTCGCTACGCCAG GCCTCACTGCCGGTGGCCGGCTGGACGCCCGGGGCATTCCCGCCGCGGTGGTCAGCCGCTTCCTCTGGGAGCGCGGGCTG GTGGTGGAGAAGACCGGCCTGTACTCCTTCCTGGTGCTGTTCTCGATGGGCGTGACCAAGGGCAAATGGAGCACGCTGGT CACCGAGTTGCTGGAGTTCAAGCGCAGCTACGACGACAACGAGCCGTTGACGGATGCGTTGCCCAGCGTCGCCCCGGCCG GCGGCGGCCGGTACGCCGGCATGGGGTTGCGCGACCTGTGCGACGAGCTCCATCGCTGCTACCGCGACCATGCCACCGCC AAGGCGATGAAGCGCATGTACACCGTGCTGCCGGAAATCGCCATGCGCCCGGCCGACGCCTATGCGCAACTGGTGCGCGG CGAAGTGGAGGCGGTGCCCATCGACCAGTTGGAGGGACGCATCGCGGCGGTCATGCTGGTGCCTTATCCGCCGGGCATCC CGCTGATCATGCCGGGCGAGCGTTTCACCGAGTCCACCCGCTCCATCCTCGACTACCTGGCCTTCGCGCAGAGCTTCGAG CGTAATTTCCCGGGCTTCGACTCGGATGTGCATGGCCTGCAGGTACACGAGGTGAATGGCGAGCGGCGCTACACGGTGGA GTGCTGCAAGTGA Protein sequence : MYKDLKFPILIVHRDIKADTVAGDRVRDIARELEQDGFSILSTASSAEGRIVASTHHGLACILVAAEGAGENQRLLQDVV ELIRMARVRAPQLPIFALGEQMTIENAPAESMSDLHQLRGILYLFEDTVPFLARQVSRAARRYLEGLLPPFFRALVEHTA QSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS TANKIVWHSMVCRDDLVLVDRNCHKSILHAIIMTGAIPLYLTPERNELGIIGPIPLAEFSRESIAAKIAASPLAQGRQPR VKLAVVTNSTYDGLCYNAEMIKQALGDSVEVLHFDEAWYAYAAFHDFYDGRYGMGTRRQDSGPLVFTTHSTHKMLAAFSQ ASMIHVQDGGARRFDRARFNEAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALANVQQNLAEDD WWFCVWQPPGVEGTDEVKTCDWVLEPNADWHGFGDAVEDYVLLDPIKVTLATPGLTAGGRLDARGIPAAVVSRFLWERGL VVEKTGLYSFLVLFSMGVTKGKWSTLVTELLEFKRSYDDNEPLTDALPSVAPAGGGRYAGMGLRDLCDELHRCYRDHATA KAMKRMYTVLPEIAMRPADAYAQLVRGEVEAVPIDQLEGRIAAVMLVPYPPGIPLIMPGERFTESTRSILDYLAFAQSFE RNFPGFDSDVHGLQVHEVNGERRYTVECCK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 2e-125 | 44 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 7e-134 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| H681_10860 | YP_007657584.1 | putative Orn/Arg/Lys decarboxylase | VFG1670 | Protein | 4e-134 | 43 |
